RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 INMT-MINDY4F8WBC2 141 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 SSNA1O43805 119 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 COX6A2Q02221 97 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 ZNF674Q2M3X9 581 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 OR10AG1Q8NH19 301 aa12.26□□□□□ -0.45
SSNA1-201ENST00000322310 TRBV25-1A0A075B6N4 114 aa12.25□□□□□ -0.45
SSNA1-201ENST00000322310 MBP02144 154 aa12.25□□□□□ -0.45
SSNA1-201ENST00000322310 MAJINQ3KP22 176 aa12.25□□□□□ -0.45
SSNA1-201ENST00000322310 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
SSNA1-201ENST00000322310 ZFP30Q9Y2G7 519 aa12.25□□□□□ -0.45
SSNA1-201ENST00000322310 IGKV2-24A0A0C4DH68 120 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 F5H697 171 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 DEFA3P59666 94 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 C20orf203Q8NBC4 194 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 HIST1H2BAQ96A08 127 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 GFRA4Q9GZZ7 299 aa12.24□□□□□ -0.45
SSNA1-201ENST00000322310 SERF2P84101 59 aa12.23□□□□□ -0.45
SSNA1-201ENST00000322310 ZNF726P1Q15940 193 aa12.23□□□□□ -0.45
SSNA1-201ENST00000322310 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 FAM74A7A6NL05 159 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 P01737 135 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 STPG4Q8N801 248 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 FMC1Q96HJ9 113 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 TNFSF18Q9UNG2 199 aa12.22□□□□□ -0.45
SSNA1-201ENST00000322310 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
SSNA1-201ENST00000322310 SSTP61278 116 aa12.21□□□□□ -0.45
SSNA1-201ENST00000322310 UBE2G1P62253 170 aa12.21□□□□□ -0.45
SSNA1-201ENST00000322310 SPINK6Q6UWN8 80 aa12.21□□□□□ -0.45
SSNA1-201ENST00000322310 C15orf56Q8N910 161 aa12.21□□□□□ -0.45
SSNA1-201ENST00000322310 ZNF471Q9BX82 626 aaPredicted RBP12.21□□□□□ -0.45
SSNA1-201ENST00000322310 NDUFS6O75380 124 aaKnown RBP12.19□□□□□ -0.46
SSNA1-201ENST00000322310 LTAP01374 205 aa12.19□□□□□ -0.46
SSNA1-201ENST00000322310 MARVELD1Q9BSK0 173 aa12.19□□□□□ -0.46
SSNA1-201ENST00000322310 A6NHS1 94 aa12.18□□□□□ -0.46
SSNA1-201ENST00000322310 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
SSNA1-201ENST00000322310 IFITM3Q01628 133 aa12.18□□□□□ -0.46
SSNA1-201ENST00000322310 SPANXN1Q5VSR9 72 aa12.18□□□□□ -0.46
SSNA1-201ENST00000322310 NKX6-2Q9C056 277 aaPredicted RBP12.18□□□□□ -0.46
SSNA1-201ENST00000322310 CTXND1A0A1B0GTU2 59 aa12.17□□□□□ -0.46
SSNA1-201ENST00000322310 GZMBP10144 247 aa12.17□□□□□ -0.46
SSNA1-201ENST00000322310 HIGD2BQ4VC39 106 aa12.17□□□□□ -0.46
SSNA1-201ENST00000322310 INO80EQ8NBZ0 244 aaPredicted RBP12.17□□□□□ -0.46
SSNA1-201ENST00000322310 SNAI2O43623 268 aa12.16□□□□□ -0.46
SSNA1-201ENST00000322310 UPK1BO75841 260 aa12.16□□□□□ -0.46
SSNA1-201ENST00000322310 A0A096LNI7 61 aa12.15□□□□□ -0.46
SSNA1-201ENST00000322310 A0A1B0GUV1 79 aa12.15□□□□□ -0.46
SSNA1-201ENST00000322310 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
SSNA1-201ENST00000322310 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
SSNA1-201ENST00000322310 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
SSNA1-201ENST00000322310 TMEM243Q9BU79 118 aa12.15□□□□□ -0.46
SSNA1-201ENST00000322310 SSBP4Q9BWG4 385 aaPredicted RBP12.15□□□□□ -0.46
SSNA1-201ENST00000322310 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
SSNA1-201ENST00000322310 KRTAP9-2Q9BYQ4 174 aa12.14□□□□□ -0.47
SSNA1-201ENST00000322310 M0QY20 66 aa12.13□□□□□ -0.47
SSNA1-201ENST00000322310 CXCL1P09341 107 aa12.13□□□□□ -0.47
SSNA1-201ENST00000322310 OR5AL1P0C617 328 aa12.13□□□□□ -0.47
SSNA1-201ENST00000322310 SULT1A2P50226 295 aa12.13□□□□□ -0.47
SSNA1-201ENST00000322310 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
SSNA1-201ENST00000322310 MGPP08493 103 aa12.12□□□□□ -0.47
SSNA1-201ENST00000322310 AKR1C3P42330 323 aa12.12□□□□□ -0.47
SSNA1-201ENST00000322310 RPL7L1Q6DKI1 246 aaKnown RBP12.12□□□□□ -0.47
SSNA1-201ENST00000322310 CFAP161Q6P656 301 aa12.12□□□□□ -0.47
SSNA1-201ENST00000322310 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
SSNA1-201ENST00000322310 IGKV3OR2-268A0A0C4DH90 116 aa12.11□□□□□ -0.47
SSNA1-201ENST00000322310 NKX2-5P52952 324 aaPredicted RBP12.11□□□□□ -0.47
SSNA1-201ENST00000322310 CST9LP1Q5W188 147 aa12.11□□□□□ -0.47
SSNA1-201ENST00000322310 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
SSNA1-201ENST00000322310 MUC2Q02817 5179 aa12.09□□□□□ -0.47
SSNA1-201ENST00000322310 Q6ZRP5 223 aa12.09□□□□□ -0.47
SSNA1-201ENST00000322310 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
SSNA1-201ENST00000322310 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
SSNA1-201ENST00000322310 H7C1H1 209 aa12.08□□□□□ -0.48
SSNA1-201ENST00000322310 UBE2L6O14933 153 aa12.08□□□□□ -0.48
SSNA1-201ENST00000322310 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
SSNA1-201ENST00000322310 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
SSNA1-201ENST00000322310 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
SSNA1-201ENST00000322310 FHITP49789 147 aa12.07□□□□□ -0.48
SSNA1-201ENST00000322310 Q5BKY6 102 aa12.07□□□□□ -0.48
SSNA1-201ENST00000322310 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
SSNA1-201ENST00000322310 AKR1C8PQ5T2L2 129 aa12.06□□□□□ -0.48
SSNA1-201ENST00000322310 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
SSNA1-201ENST00000322310 NDUFA13Q9P0J0 144 aa12.06□□□□□ -0.48
SSNA1-201ENST00000322310 AMTP48728 403 aa12.05□□□□□ -0.48
SSNA1-201ENST00000322310 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
SSNA1-201ENST00000322310 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
SSNA1-201ENST00000322310 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
SSNA1-201ENST00000322310 BORCS7-ASMTA0A0B4J1R7 106 aa12.04□□□□□ -0.48
SSNA1-201ENST00000322310 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
SSNA1-201ENST00000322310 BAGE2Q86Y30 109 aa12.04□□□□□ -0.48
SSNA1-201ENST00000322310 TPPP3Q9BW30 176 aa12.04□□□□□ -0.48
SSNA1-201ENST00000322310 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
SSNA1-201ENST00000322310 FAM231BA6NCW3 169 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms