RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 GAGE2AQ6NT46 116 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 TRGV1A0A0A0MS02 117 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 XGP55808 180 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
VARS2-201ENST00000321897 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
VARS2-201ENST00000321897 STHQ8IWL8 128 aa11.66□□□□□ -0.54
VARS2-201ENST00000321897 UBE2L6O14933 153 aa11.66□□□□□ -0.54
VARS2-201ENST00000321897 LMO4P61968 165 aa11.66□□□□□ -0.54
VARS2-201ENST00000321897 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
VARS2-201ENST00000321897 C5orf56Q8N8D9 126 aa11.66□□□□□ -0.54
VARS2-201ENST00000321897 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
VARS2-201ENST00000321897 Q6ZS46 218 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
VARS2-201ENST00000321897 TNRC18O15417 2968 aaPredicted RBP11.65□□□□□ -0.54
VARS2-201ENST00000321897 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 CRYGBP07316 175 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 SIRPDQ9H106 197 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 HIST1H4AP62805 103 aaKnown RBP11.65□□□□□ -0.54
VARS2-201ENST00000321897 DAND5Q8N907 189 aa11.65□□□□□ -0.54
VARS2-201ENST00000321897 TRAV13-1A0A0B4J241 112 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 A0A096LNJ9 63 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 Q96MF0 132 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 APRG1Q8IVJ8 170 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
VARS2-201ENST00000321897 PF4P02776 101 aa11.63□□□□□ -0.55
VARS2-201ENST00000321897 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
VARS2-201ENST00000321897 RAI1Q7Z5J4 1906 aaPredicted RBP11.63□□□□□ -0.55
VARS2-201ENST00000321897 NDUFA4O00483 81 aa11.63□□□□□ -0.55
VARS2-201ENST00000321897 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
VARS2-201ENST00000321897 SLURP1P55000 103 aa11.62□□□□□ -0.55
VARS2-201ENST00000321897 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
VARS2-201ENST00000321897 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
VARS2-201ENST00000321897 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
VARS2-201ENST00000321897 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
VARS2-201ENST00000321897 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
VARS2-201ENST00000321897 TEX49A0A1B0GTD5 131 aa11.61□□□□□ -0.55
VARS2-201ENST00000321897 PRM2P04554 102 aa11.61□□□□□ -0.55
VARS2-201ENST00000321897 LINC01620Q4KN68 170 aa11.61□□□□□ -0.55
VARS2-201ENST00000321897 LY6LH3BQJ8 138 aa11.6□□□□□ -0.55
VARS2-201ENST00000321897 NDUFA11Q86Y39 141 aa11.6□□□□□ -0.55
VARS2-201ENST00000321897 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
VARS2-201ENST00000321897 CFAP46Q8IYW2 2715 aa11.6□□□□□ -0.55
VARS2-201ENST00000321897 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 EDN2P20800 178 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 HOXD3P31249 432 aaPredicted RBP11.59□□□□□ -0.55
VARS2-201ENST00000321897 PRIMA1Q86XR5 153 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 DEFB130BP0DP73 79 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 DEFB130AP0DP74 79 aa11.59□□□□□ -0.55
VARS2-201ENST00000321897 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 HHLA3Q9XRX5 114 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 GATA3P23771 443 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 FBXL19-AS1Q494R0 122 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 MDFICQ9P1T7 246 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 C11orf21Q9P2W6 132 aa11.58□□□□□ -0.56
VARS2-201ENST00000321897 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
VARS2-201ENST00000321897 C10orf105Q8TEF2 133 aa11.57□□□□□ -0.56
VARS2-201ENST00000321897 IGHV1OR15-1A0A075B7D0 117 aa11.57□□□□□ -0.56
VARS2-201ENST00000321897 Q8N1Y9 231 aa11.57□□□□□ -0.56
VARS2-201ENST00000321897 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
VARS2-201ENST00000321897 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
VARS2-201ENST00000321897 LINC00158P58513 81 aa11.56□□□□□ -0.56
VARS2-201ENST00000321897 TRAV4A0A0B4J268 109 aa11.56□□□□□ -0.56
VARS2-201ENST00000321897 TRGV4A0A0C4DH28 118 aa11.56□□□□□ -0.56
VARS2-201ENST00000321897 CHCHD5Q9BSY4 110 aa11.56□□□□□ -0.56
VARS2-201ENST00000321897 CCDC179H3BU77 68 aa11.56□□□□□ -0.56
VARS2-201ENST00000321897 TNFRSF13BO14836 293 aaPredicted RBP11.56□□□□□ -0.56
VARS2-201ENST00000321897 TRGV11A0A075B6L2 103 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 TNRC6BQ9UPQ9 1833 aaKnown RBP11.55□□□□□ -0.56
VARS2-201ENST00000321897 RELNP78509 3460 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 A0A087WW49 117 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 A0A096LPF7 62 aa11.55□□□□□ -0.56
VARS2-201ENST00000321897 FLNCQ14315 2725 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 CFAP126Q5VTH2 177 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
VARS2-201ENST00000321897 TMEM141Q96I45 108 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
VARS2-201ENST00000321897 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
VARS2-201ENST00000321897 P0DMU3 169 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
VARS2-201ENST00000321897 SUMO4Q6EEV6 95 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms