RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 ZNF22P17026 224 aaPredicted RBP18.73■□□□□ 0.59
SENP3-201ENST00000321337 Q8N1Y9 231 aa18.73■□□□□ 0.59
SENP3-201ENST00000321337 SORL1Q92673 2214 aa18.73■□□□□ 0.59
SENP3-201ENST00000321337 C19orf84I3L1E1 186 aa18.72■□□□□ 0.59
SENP3-201ENST00000321337 SLC25A20O43772 301 aa18.72■□□□□ 0.59
SENP3-201ENST00000321337 C9orf85Q96MD7 179 aa18.72■□□□□ 0.59
SENP3-201ENST00000321337 RNF183Q96D59 192 aa18.71■□□□□ 0.59
SENP3-201ENST00000321337 LEPROTO15243 131 aa18.71■□□□□ 0.59
SENP3-201ENST00000321337 IGHV4-61A0A0C4DH41 118 aa18.7■□□□□ 0.58
SENP3-201ENST00000321337 RHODO00212 210 aa18.7■□□□□ 0.58
SENP3-201ENST00000321337 C10orf99Q6UWK7 81 aa18.7■□□□□ 0.58
SENP3-201ENST00000321337 CELSR2Q9HCU4 2923 aa18.69■□□□□ 0.58
SENP3-201ENST00000321337 SPINK13Q1W4C9 94 aa18.69■□□□□ 0.58
SENP3-201ENST00000321337 BEX4Q9NWD9 120 aaPredicted RBP18.69■□□□□ 0.58
SENP3-201ENST00000321337 A6NDX4 124 aa18.68■□□□□ 0.58
SENP3-201ENST00000321337 NSUN5P1Q3KNT7 163 aa18.68■□□□□ 0.58
SENP3-201ENST00000321337 ERG28Q9UKR5 140 aa18.68■□□□□ 0.58
SENP3-201ENST00000321337 IGLV1-40P01703 118 aa18.68■□□□□ 0.58
SENP3-201ENST00000321337 C20orf203Q8NBC4 194 aa18.67■□□□□ 0.58
SENP3-201ENST00000321337 IGLV4-3A0A075B6K6 122 aa18.67■□□□□ 0.58
SENP3-201ENST00000321337 ID1P41134 155 aa18.67■□□□□ 0.58
SENP3-201ENST00000321337 CEMP1Q6PRD7 247 aaPredicted RBP18.67■□□□□ 0.58
SENP3-201ENST00000321337 RNASE13Q5GAN3 156 aaKnown RBP18.66■□□□□ 0.58
SENP3-201ENST00000321337 IGHV3-73A0A0B4J1V6 119 aa18.66■□□□□ 0.58
SENP3-201ENST00000321337 SPXQ9BT56 116 aa18.66■□□□□ 0.58
SENP3-201ENST00000321337 H3BUA1 57 aa18.65■□□□□ 0.58
SENP3-201ENST00000321337 Q1RN00 199 aa18.65■□□□□ 0.58
SENP3-201ENST00000321337 FAM104AQ969W3 186 aa18.65■□□□□ 0.58
SENP3-201ENST00000321337 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.65■□□□□ 0.585e-7■■■■□ 20
SENP3-201ENST00000321337 TRAV8-3A0A0A6YYJ7 113 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 PROK1P58294 105 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 A0A0J9YXY3 114 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 BRI3O95415 125 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 RHOHQ15669 191 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 NTN5Q8WTR8 489 aaPredicted RBP18.64■□□□□ 0.57
SENP3-201ENST00000321337 VCX2Q9H322 139 aa18.64■□□□□ 0.57
SENP3-201ENST00000321337 A0A0J9YX75 114 aa18.63■□□□□ 0.57
SENP3-201ENST00000321337 Q9UF83 564 aa18.63■□□□□ 0.57
SENP3-201ENST00000321337 M0R2P5 195 aa18.62■□□□□ 0.57
SENP3-201ENST00000321337 PRM2P04554 102 aa18.62■□□□□ 0.57
SENP3-201ENST00000321337 Q6ZSV7 163 aa18.62■□□□□ 0.57
SENP3-201ENST00000321337 A0A0B4J2C4 111 aa18.62■□□□□ 0.57
SENP3-201ENST00000321337 A8MZ25 164 aa18.62■□□□□ 0.57
SENP3-201ENST00000321337 IGHV1OR15-1A0A075B7D0 117 aa18.61■□□□□ 0.57
SENP3-201ENST00000321337 CFHR3Q02985 330 aa18.61■□□□□ 0.57
SENP3-201ENST00000321337 I3L3M4 83 aa18.61■□□□□ 0.57
SENP3-201ENST00000321337 CRLF1O75462 422 aa18.61■□□□□ 0.57
SENP3-201ENST00000321337 IGHV3-30-3P0DP02 117 aa18.61■□□□□ 0.57
SENP3-201ENST00000321337 SPG11Q96JI7 2443 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 DOPEY2Q9Y3R5 2298 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 ADAMTSL4-AS1Q5T5F5 129 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 HTN1P15515 57 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 NPC2P61916 151 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 LITAFQ99732 161 aa18.6■□□□□ 0.57
SENP3-201ENST00000321337 TEX49A0A1B0GTD5 131 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 TRIAP1O43715 76 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 LY6DQ14210 128 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 CSPG4Q6UVK1 2322 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 K7EMT4 169 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 CITED1Q99966 193 aa18.59■□□□□ 0.57
SENP3-201ENST00000321337 LINC01620Q4KN68 170 aa18.58■□□□□ 0.57
SENP3-201ENST00000321337 DUX5Q96PT3 197 aa18.58■□□□□ 0.57
SENP3-201ENST00000321337 AVPP01185 164 aa18.58■□□□□ 0.56
SENP3-201ENST00000321337 PRSS2P07478 247 aa18.57■□□□□ 0.56
SENP3-201ENST00000321337 RBMY1A1P0DJD3 496 aaKnown RBP18.57■□□□□ 0.56
SENP3-201ENST00000321337 RBMY1CP0DJD4 496 aa18.57■□□□□ 0.56
SENP3-201ENST00000321337 RBMY1FQ15415 496 aaKnown RBP18.57■□□□□ 0.56
SENP3-201ENST00000321337 ANAPC13Q9BS18 74 aa18.57■□□□□ 0.56
SENP3-201ENST00000321337 ZFAND6Q6FIF0 208 aa18.57■□□□□ 0.56
SENP3-201ENST00000321337 TRAV4A0A0B4J268 109 aa18.56■□□□□ 0.56
SENP3-201ENST00000321337 NCOR2Q9Y618 2525 aa18.56■□□□□ 0.56
SENP3-201ENST00000321337 PRRC2AP48634 2157 aaKnown RBP18.56■□□□□ 0.56
SENP3-201ENST00000321337 CD28P10747 220 aa18.55■□□□□ 0.56
SENP3-201ENST00000321337 CSMD2Q7Z408 3487 aa18.55■□□□□ 0.56
SENP3-201ENST00000321337 TEX29Q8N6K0 151 aa18.55■□□□□ 0.56
SENP3-201ENST00000321337 KNCNA6PVL3 124 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 TMEM262E9PQX1 116 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 TIMM21Q9BVV7 248 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 CHD8Q9HCK8 2581 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 K7EQG2 157 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 NHLRC4P0CG21 123 aaPredicted RBP18.54■□□□□ 0.56
SENP3-201ENST00000321337 ATXN8Q156A1 80 aa18.54■□□□□ 0.56
SENP3-201ENST00000321337 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.53■□□□□ 0.56
SENP3-201ENST00000321337 IGHV4-30-2A0A087WSY4 118 aa18.52■□□□□ 0.56
SENP3-201ENST00000321337 PSMB8P28062 276 aa18.52■□□□□ 0.56
SENP3-201ENST00000321337 SNRPD3P62318 126 aaKnown RBP18.52■□□□□ 0.56
SENP3-201ENST00000321337 SYNJ2BPP57105 145 aa18.52■□□□□ 0.55
SENP3-201ENST00000321337 ODF3Q96PU9 254 aa18.52■□□□□ 0.55
SENP3-201ENST00000321337 PIMREGQ9BSJ6 248 aa18.51■□□□□ 0.55
SENP3-201ENST00000321337 M0QXV9 152 aa18.51■□□□□ 0.55
SENP3-201ENST00000321337 Q6ZSN1 163 aa18.5■□□□□ 0.55
SENP3-201ENST00000321337 MRPS36P82909 103 aaKnown RBP18.49■□□□□ 0.55
SENP3-201ENST00000321337 C10orf105Q8TEF2 133 aa18.49■□□□□ 0.55
SENP3-201ENST00000321337 SS18L2Q9UHA2 77 aa18.49■□□□□ 0.55
SENP3-201ENST00000321337 TRBV30A0A0K0K1B3 111 aa18.49■□□□□ 0.55
SENP3-201ENST00000321337 CLEC2BQ92478 149 aa18.49■□□□□ 0.55
SENP3-201ENST00000321337 NDUFA12Q9UI09 145 aa18.49■□□□□ 0.55
SENP3-201ENST00000321337 CREBBPQ92793 2442 aa18.48■□□□□ 0.55
SENP3-201ENST00000321337 ITPR1Q14643 2758 aa18.48■□□□□ 0.55
SENP3-201ENST00000321337 IGHV4-59P01825 116 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms