RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 INSP01308 110 aa9.61□□□□□ -0.87
DNMT3A-202ENST00000321117 C11orf71Q6IPW1 123 aa9.61□□□□□ -0.87
DNMT3A-202ENST00000321117 K7EMT4 169 aa9.6□□□□□ -0.87
DNMT3A-202ENST00000321117 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
DNMT3A-202ENST00000321117 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
DNMT3A-202ENST00000321117 COX6B1P14854 86 aa9.6□□□□□ -0.87
DNMT3A-202ENST00000321117 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
DNMT3A-202ENST00000321117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 U3KQE9 123 aa9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 CRPP02741 224 aa9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 UBE2E2Q96LR5 201 aa9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
DNMT3A-202ENST00000321117 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 DSCR9P59020 149 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 CITED1Q99966 193 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 PTPN13Q12923 2485 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV4-59P01825 116 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 LINC00158P58513 81 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 A0A087WW49 117 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 A0A0J9YX75 114 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 A0A1W2PRX2 142 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 GATA3P23771 443 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 GPHB5Q86YW7 130 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 ZNRF2Q8NHG8 242 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV3-30P01768 117 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV3-30-5P0DP03 117 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 Q6ZS46 218 aa9.57□□□□□ -0.88
DNMT3A-202ENST00000321117 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 UBE2D1P51668 147 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 RNF183Q96D59 192 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 LINC01356Q8N9X3 169 aa9.56□□□□□ -0.88
DNMT3A-202ENST00000321117 NCOR2Q9Y618 2525 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 LGALS9O00182 355 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 DEFB112Q30KQ8 113 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 TRGV4A0A0C4DH28 118 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 Q9H8V8 135 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 A6NDX4 124 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 ELANEP08246 267 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 CDSNQ15517 529 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 CHCHD5Q9BSY4 110 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 HIVEP3Q5T1R4 2406 aa9.55□□□□□ -0.88
DNMT3A-202ENST00000321117 NSUN5P1Q3KNT7 163 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 CEMP1Q6PRD7 247 aaPredicted RBP9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 MAPK1IP1LQ8NDC0 245 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV1-58A0A0C4DH39 117 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 M0QY20 66 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 XGP55808 180 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 HERVK_113P63121 156 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 IGHV4-30-2A0A087WSY4 118 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 DAND5Q8N907 189 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 SPEGQ15772 3267 aa9.54□□□□□ -0.88
DNMT3A-202ENST00000321117 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 MYO18BQ8IUG5 2567 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 H3BT86 120 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 C10orf105Q8TEF2 133 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 CLEC2BQ92478 149 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 KLLNB2CW77 178 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 PAX4O43316 350 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 C9orf153Q5TBE3 101 aa9.53□□□□□ -0.88
DNMT3A-202ENST00000321117 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.88
DNMT3A-202ENST00000321117 REV3LO60673 3130 aa9.52□□□□□ -0.89
DNMT3A-202ENST00000321117 P0DMU3 169 aa9.52□□□□□ -0.89
DNMT3A-202ENST00000321117 FAM231AP0DMU4 169 aa9.52□□□□□ -0.89
DNMT3A-202ENST00000321117 FAM231CP0DMU5 169 aa9.52□□□□□ -0.89
DNMT3A-202ENST00000321117 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 ODF3Q96PU9 254 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 UBE2D3P61077 147 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 UBE2D2P62837 147 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 DEFB136Q30KP8 78 aa9.51□□□□□ -0.89
DNMT3A-202ENST00000321117 NBEAQ8NFP9 2946 aa9.5□□□□□ -0.89
DNMT3A-202ENST00000321117 K7EQG2 157 aa9.5□□□□□ -0.89
DNMT3A-202ENST00000321117 MIAQ16674 131 aa9.5□□□□□ -0.89
DNMT3A-202ENST00000321117 EDA2RQ9HAV5 297 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms