RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 A8MWV9 139 aa7.9□□□□□ -1.15
COL3A1-202ENST00000317840 CRYBG3Q68DQ2 2970 aa7.9□□□□□ -1.15
COL3A1-202ENST00000317840 DEFB113Q30KQ7 82 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 SPXQ9BT56 116 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 PRSS47A8MTI9 375 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 ADARB2-AS1A8MUL3 147 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 IGHG2P01859 326 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 KNCNA6PVL3 124 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 TMEM141Q96I45 108 aa7.89□□□□□ -1.15
COL3A1-202ENST00000317840 FLNAP21333 2647 aaKnown RBP7.88□□□□□ -1.15
COL3A1-202ENST00000317840 TSPAN13O95857 204 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 UTP20O75691 2785 aaKnown RBP7.88□□□□□ -1.15
COL3A1-202ENST00000317840 WFDC11Q8NEX6 87 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 ITPR3Q14573 2671 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 CD28P10747 220 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 NPC2P61916 151 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
COL3A1-202ENST00000317840 MORN3Q6PF18 240 aaPredicted RBP7.88□□□□□ -1.15
COL3A1-202ENST00000317840 Q8N1Y9 231 aa7.88□□□□□ -1.15
COL3A1-202ENST00000317840 DGAT2L7PQ6IED9 249 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 C9JAW5 83 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 CKS1BP61024 79 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 FOXI1Q12951 378 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 ATP6V0BQ99437 205 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 ERG28Q9UKR5 140 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 A0A0J9YY99 117 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
COL3A1-202ENST00000317840 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 NDUFA11Q86Y39 141 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 C1QTNF4Q9BXJ3 329 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 A0A0J9YXV3 536 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 A4D1N5 150 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 MUC4Q99102 2169 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 SOCS3O14543 225 aa7.86□□□□□ -1.15
COL3A1-202ENST00000317840 TRPT1Q86TN4 253 aaKnown RBP7.86□□□□□ -1.15
COL3A1-202ENST00000317840 H3BUA1 57 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 NSUN5P1Q3KNT7 163 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 C10orf126Q8N4M7 172 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 CRYGDP07320 174 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 GATA3P23771 443 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 POLR2KP53803 58 aaKnown RBP7.85□□□□□ -1.15
COL3A1-202ENST00000317840 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 TCL1BO95988 128 aa7.85□□□□□ -1.15
COL3A1-202ENST00000317840 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 A6NDX4 124 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 IGIPA6NJ69 53 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 ZNRF2Q8NHG8 242 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 PPDPFLQ8WWR9 84 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 I3L3M4 83 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 GEMIN7Q9H840 131 aaKnown RBP7.84□□□□□ -1.15
COL3A1-202ENST00000317840 ITPR1Q14643 2758 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 IGLV4-69A0A075B6H9 119 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 IGHV4OR15-8A0A075B7B6 117 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 A0A087WW49 117 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 KLLNB2CW77 178 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 TSHBP01222 138 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
COL3A1-202ENST00000317840 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 CFC1P0CG37 223 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 DEFB131AP59861 70 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 CEMP1Q6PRD7 247 aaPredicted RBP7.83□□□□□ -1.16
COL3A1-202ENST00000317840 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 IGHV3-16A0A0C4DH30 117 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
COL3A1-202ENST00000317840 CELSR1Q9NYQ6 3014 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 SLC25A20O43772 301 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 P0DMU3 169 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 FAM231AP0DMU4 169 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 FAM231CP0DMU5 169 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 MUSTN1Q8IVN3 82 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 DCANP1Q8TF63 244 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 VPREB3Q9UKI3 123 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 BSNQ9UPA5 3926 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 UBE2D1P51668 147 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 IGHV3-38A0A0C4DH36 116 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 A0A0J9YX75 114 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 LINC01619G3V211 115 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 M0QY20 66 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 SLURP1P55000 103 aa7.82□□□□□ -1.16
COL3A1-202ENST00000317840 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 COX6CP09669 75 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 LINC00315P59091 139 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 C20orf203Q8NBC4 194 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 LINC01587Q99440 93 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 TCTEX1D4Q5JR98 221 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 K7EMT4 169 aa7.81□□□□□ -1.16
COL3A1-202ENST00000317840 PRM2P04554 102 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms