RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 SSBP4Q9BWG4 385 aaPredicted RBP13.08□□□□□ -0.32
SERF1A-201ENST00000317633 SMIM17P0DL12 118 aa13.07□□□□□ -0.32
SERF1A-201ENST00000317633 FAM213BQ8TBF2 198 aa13.07□□□□□ -0.32
SERF1A-201ENST00000317633 SCO2A0A1W2PP80 73 aa13.06□□□□□ -0.32
SERF1A-201ENST00000317633 ZNF345Q14585 488 aa13.06□□□□□ -0.32
SERF1A-201ENST00000317633 A0A1B0GV50 99 aa13.05□□□□□ -0.32
SERF1A-201ENST00000317633 HLA-DQA1P01909 254 aa13.05□□□□□ -0.32
SERF1A-201ENST00000317633 RGS21Q2M5E4 152 aa13.05□□□□□ -0.32
SERF1A-201ENST00000317633 KCNRGQ8N5I3 272 aa13.05□□□□□ -0.32
SERF1A-201ENST00000317633 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
SERF1A-201ENST00000317633 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
SERF1A-201ENST00000317633 OXTP01178 125 aa13.04□□□□□ -0.32
SERF1A-201ENST00000317633 KRTAP10-4P60372 401 aaPredicted RBP13.04□□□□□ -0.32
SERF1A-201ENST00000317633 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
SERF1A-201ENST00000317633 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
SERF1A-201ENST00000317633 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 H2AFB1P0C5Y9 115 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 SSTP61278 116 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 TMUB2Q71RG4 321 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 AP1S3Q96PC3 154 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 DERL1Q9BUN8 251 aa13.03□□□□□ -0.32
SERF1A-201ENST00000317633 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.33
SERF1A-201ENST00000317633 A0A0D9SG52 128 aa13.01□□□□□ -0.33
SERF1A-201ENST00000317633 SMLR1H3BR10 107 aa13.01□□□□□ -0.33
SERF1A-201ENST00000317633 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
SERF1A-201ENST00000317633 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
SERF1A-201ENST00000317633 KIF25-AS1Q9Y6Z4 181 aa13.01□□□□□ -0.33
SERF1A-201ENST00000317633 KANTRA0A1W2PQU2 76 aa13□□□□□ -0.33
SERF1A-201ENST00000317633 HMSDA8MTL9 139 aa13□□□□□ -0.33
SERF1A-201ENST00000317633 PRSS1P07477 247 aa13□□□□□ -0.33
SERF1A-201ENST00000317633 RPL35P42766 123 aaKnown RBP13□□□□□ -0.33
SERF1A-201ENST00000317633 RBX1P62877 108 aa13□□□□□ -0.33
SERF1A-201ENST00000317633 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
SERF1A-201ENST00000317633 H7C1H1 209 aa12.99□□□□□ -0.33
SERF1A-201ENST00000317633 GAGE6Q13070 117 aa12.99□□□□□ -0.33
SERF1A-201ENST00000317633 LINC00269Q8N2A0 174 aa12.99□□□□□ -0.33
SERF1A-201ENST00000317633 C9orf163Q8N9P6 203 aa12.99□□□□□ -0.33
SERF1A-201ENST00000317633 IGHV1-24A0A0C4DH33 117 aa12.98□□□□□ -0.33
SERF1A-201ENST00000317633 BCL2L11O43521 198 aa12.98□□□□□ -0.33
SERF1A-201ENST00000317633 RPL37AP61513 92 aaKnown RBP12.98□□□□□ -0.33
SERF1A-201ENST00000317633 IQCJQ1A5X6 159 aa12.98□□□□□ -0.33
SERF1A-201ENST00000317633 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
SERF1A-201ENST00000317633 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
SERF1A-201ENST00000317633 RPS20P60866 119 aaKnown RBP12.97□□□□□ -0.33
SERF1A-201ENST00000317633 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
SERF1A-201ENST00000317633 MANBALQ9NQG1 85 aa12.97□□□□□ -0.33
SERF1A-201ENST00000317633 MGPP08493 103 aa12.96□□□□□ -0.33
SERF1A-201ENST00000317633 TPPP3Q9BW30 176 aa12.96□□□□□ -0.33
SERF1A-201ENST00000317633 M0QY20 66 aa12.95□□□□□ -0.34
SERF1A-201ENST00000317633 CACNG7P62955 275 aa12.95□□□□□ -0.34
SERF1A-201ENST00000317633 REG3AQ06141 175 aa12.95□□□□□ -0.34
SERF1A-201ENST00000317633 FER1L6-AS1Q8NA97 138 aa12.95□□□□□ -0.34
SERF1A-201ENST00000317633 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 P01737 135 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 KRTAP26-1Q6PEX3 210 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 OR2D3Q8NGH3 330 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 C11orf52Q96A22 123 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 GNG13Q9P2W3 67 aa12.94□□□□□ -0.34
SERF1A-201ENST00000317633 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
SERF1A-201ENST00000317633 XKRY2A2RUG3 117 aa12.93□□□□□ -0.34
SERF1A-201ENST00000317633 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
SERF1A-201ENST00000317633 GZMBP10144 247 aa12.93□□□□□ -0.34
SERF1A-201ENST00000317633 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
SERF1A-201ENST00000317633 IGLV10-54A0A075B6I4 117 aa12.92□□□□□ -0.34
SERF1A-201ENST00000317633 SUMO4Q6EEV6 95 aa12.92□□□□□ -0.34
SERF1A-201ENST00000317633 SMIM12Q96EX1 92 aa12.92□□□□□ -0.34
SERF1A-201ENST00000317633 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 F2Z2F3 143 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 RASL11AQ6T310 242 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.91□□□□□ -0.34
SERF1A-201ENST00000317633 PKHD1L1Q86WI1 4243 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
SERF1A-201ENST00000317633 C19orf71A6NCJ1 209 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 GNG4P50150 75 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 RAB5CP51148 216 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
SERF1A-201ENST00000317633 CNBPP62633 177 aaKnown RBP12.9□□□□□ -0.34
SERF1A-201ENST00000317633 CCL20P78556 96 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 AP5S1Q9NUS5 200 aa12.9□□□□□ -0.34
SERF1A-201ENST00000317633 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
SERF1A-201ENST00000317633 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
SERF1A-201ENST00000317633 EIF5AL1Q6IS14 154 aaKnown RBP12.89□□□□□ -0.35
SERF1A-201ENST00000317633 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
SERF1A-201ENST00000317633 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
SERF1A-201ENST00000317633 BIN3Q9NQY0 253 aa12.89□□□□□ -0.35
SERF1A-201ENST00000317633 UBE2L6O14933 153 aa12.88□□□□□ -0.35
SERF1A-201ENST00000317633 IFNA1P01562 189 aa12.88□□□□□ -0.35
SERF1A-201ENST00000317633 DPH3P1Q9H4G8 78 aa12.88□□□□□ -0.35
SERF1A-201ENST00000317633 PDE6DO43924 150 aa12.87□□□□□ -0.35
SERF1A-201ENST00000317633 PLA2G2DQ9UNK4 145 aa12.87□□□□□ -0.35
SERF1A-201ENST00000317633 IGLV4-60A0A075B6I1 120 aa12.86□□□□□ -0.35
SERF1A-201ENST00000317633 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
SERF1A-201ENST00000317633 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms