RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 HAMPP81172 84 aa11.33□□□□□ -0.6
HMGCLL1-202ENST00000308161 WFDC2Q14508 124 aa11.33□□□□□ -0.6
HMGCLL1-202ENST00000308161 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
HMGCLL1-202ENST00000308161 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.33□□□□□ -0.6
HMGCLL1-202ENST00000308161 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
HMGCLL1-202ENST00000308161 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 XGP55808 180 aa11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 SMIM12Q96EX1 92 aa11.32□□□□□ -0.6
HMGCLL1-202ENST00000308161 TRBV6-8A0A0A6YYG3 113 aa11.31□□□□□ -0.6
HMGCLL1-202ENST00000308161 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
HMGCLL1-202ENST00000308161 RMI2Q96E14 147 aa11.31□□□□□ -0.6
HMGCLL1-202ENST00000308161 CHCHD5Q9BSY4 110 aa11.31□□□□□ -0.6
HMGCLL1-202ENST00000308161 KIF25-AS1Q9Y6Z4 181 aa11.31□□□□□ -0.6
HMGCLL1-202ENST00000308161 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-202ENST00000308161 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-202ENST00000308161 CACNG7P62955 275 aa11.3□□□□□ -0.6
HMGCLL1-202ENST00000308161 ELOBQ15370 118 aa11.3□□□□□ -0.6
HMGCLL1-202ENST00000308161 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
HMGCLL1-202ENST00000308161 EPM2AB3EWF7 344 aa11.29□□□□□ -0.6
HMGCLL1-202ENST00000308161 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
HMGCLL1-202ENST00000308161 C15orf54Q8N8G6 183 aa11.29□□□□□ -0.6
HMGCLL1-202ENST00000308161 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
HMGCLL1-202ENST00000308161 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
HMGCLL1-202ENST00000308161 CEBPGP53567 150 aa11.28□□□□□ -0.6
HMGCLL1-202ENST00000308161 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
HMGCLL1-202ENST00000308161 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
HMGCLL1-202ENST00000308161 NUDT10Q8NFP7 164 aa11.28□□□□□ -0.6
HMGCLL1-202ENST00000308161 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
HMGCLL1-202ENST00000308161 FAT1Q14517 4588 aa11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 F2Z2F3 143 aa11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 CRPP02741 224 aa11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 NKX2-5P52952 324 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-202ENST00000308161 H7C1H1 209 aa11.26□□□□□ -0.61
HMGCLL1-202ENST00000308161 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-202ENST00000308161 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
HMGCLL1-202ENST00000308161 Q8N976 141 aa11.26□□□□□ -0.61
HMGCLL1-202ENST00000308161 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
HMGCLL1-202ENST00000308161 K7EN84 100 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 M0QY20 66 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 NTF3P20783 257 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 GAGE6Q13070 117 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 NTM-AS1Q6ZSK4 140 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 FRZBQ92765 325 aa11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-202ENST00000308161 TRBV25-1A0A075B6N4 114 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 Q0VG73 95 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 TWIST1Q15672 202 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 Q5VSD8 79 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 C1orf43Q9BWL3 253 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 DPH3P1Q9H4G8 78 aa11.24□□□□□ -0.61
HMGCLL1-202ENST00000308161 CTRLP40313 264 aa11.23□□□□□ -0.61
HMGCLL1-202ENST00000308161 PKIAP61925 76 aa11.23□□□□□ -0.61
HMGCLL1-202ENST00000308161 LINC01620Q4KN68 170 aa11.23□□□□□ -0.61
HMGCLL1-202ENST00000308161 ATRAIDQ6UW56 229 aa11.23□□□□□ -0.61
HMGCLL1-202ENST00000308161 A0A1B0GVG6 124 aa11.22□□□□□ -0.61
HMGCLL1-202ENST00000308161 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
HMGCLL1-202ENST00000308161 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
HMGCLL1-202ENST00000308161 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
HMGCLL1-202ENST00000308161 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.61
HMGCLL1-202ENST00000308161 IGHV1-24A0A0C4DH33 117 aa11.21□□□□□ -0.61
HMGCLL1-202ENST00000308161 TMEM250H0YL14 139 aa11.21□□□□□ -0.61
HMGCLL1-202ENST00000308161 RBX1P62877 108 aa11.21□□□□□ -0.61
HMGCLL1-202ENST00000308161 EIF5A2Q9GZV4 153 aaKnown RBP11.21□□□□□ -0.61
HMGCLL1-202ENST00000308161 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
HMGCLL1-202ENST00000308161 HLA-DQA1P01909 254 aa11.2□□□□□ -0.62
HMGCLL1-202ENST00000308161 IQCJQ1A5X6 159 aa11.19□□□□□ -0.62
HMGCLL1-202ENST00000308161 WDR73Q6P4I2 378 aa11.19□□□□□ -0.62
HMGCLL1-202ENST00000308161 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
HMGCLL1-202ENST00000308161 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
HMGCLL1-202ENST00000308161 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
HMGCLL1-202ENST00000308161 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
HMGCLL1-202ENST00000308161 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
HMGCLL1-202ENST00000308161 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
HMGCLL1-202ENST00000308161 FAM229AH3BQW9 127 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 MIAQ16674 131 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 SMIM15Q7Z3B0 74 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 PGLYRP4Q96LB8 373 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 CNFNQ9BYD5 112 aa11.17□□□□□ -0.62
HMGCLL1-202ENST00000308161 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
HMGCLL1-202ENST00000308161 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 A8MWL6 223 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 UBE2L6O14933 153 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 AMTP48728 403 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 COTL1Q14019 142 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
HMGCLL1-202ENST00000308161 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms