RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SIRPDQ9H106 197 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 C11orf44Q8N8P7 122 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 CLEC2BQ92478 149 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 FRYLO94915 3013 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 IGF2-ASQ6U949 168 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 RHODO00212 210 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 CEMP1Q6PRD7 247 aaPredicted RBP10.17□□□□□ -0.78
SEC23A-201ENST00000307712 ICOSQ9Y6W8 199 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 DSPP15924 2871 aaKnown RBP10.17□□□□□ -0.78
SEC23A-201ENST00000307712 FRYQ5TBA9 3013 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 PRO3102Q9H379 93 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 IGHG4P01861 327 aa10.17□□□□□ -0.78
SEC23A-201ENST00000307712 IGLV2-18A0A075B6J9 118 aa10.16□□□□□ -0.78
SEC23A-201ENST00000307712 CRPP02741 224 aa10.16□□□□□ -0.78
SEC23A-201ENST00000307712 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
SEC23A-201ENST00000307712 EDA2RQ9HAV5 297 aa10.16□□□□□ -0.78
SEC23A-201ENST00000307712 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
SEC23A-201ENST00000307712 TRBV10-2A0A0K0K1G8 114 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 A0A1W2PRX2 142 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 CLPSL1A2RUU4 121 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.78
SEC23A-201ENST00000307712 EBI3Q14213 229 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 COX8CQ7Z4L0 72 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.78
SEC23A-201ENST00000307712 RS1O15537 224 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 IGHV3-33P01772 117 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 STHQ8IWL8 128 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
SEC23A-201ENST00000307712 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 XCL2Q9UBD3 114 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 C11orf68Q9H3H3 251 aaKnown RBP10.14□□□□□ -0.79
SEC23A-201ENST00000307712 Q9H8V8 135 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 ABCA2Q9BZC7 2435 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 PAX4O43316 350 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 Q8N6K4 173 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
SEC23A-201ENST00000307712 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
SEC23A-201ENST00000307712 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
SEC23A-201ENST00000307712 PEMTQ9UBM1 199 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 LINC01619G3V211 115 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 P0DMU3 169 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 UBE2D1P51668 147 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 ADORA2A-AS1P86434 159 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
SEC23A-201ENST00000307712 B4DSR2 109 aa10.12□□□□□ -0.79
SEC23A-201ENST00000307712 MSMBP08118 114 aa10.12□□□□□ -0.79
SEC23A-201ENST00000307712 MAPK1IP1LQ8NDC0 245 aa10.12□□□□□ -0.79
SEC23A-201ENST00000307712 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
SEC23A-201ENST00000307712 FASNP49327 2511 aaKnown RBP10.12□□□□□ -0.79
SEC23A-201ENST00000307712 IGHV4-61A0A0C4DH41 118 aa10.11□□□□□ -0.79
SEC23A-201ENST00000307712 GNLYP22749 145 aa10.11□□□□□ -0.79
SEC23A-201ENST00000307712 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
SEC23A-201ENST00000307712 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
SEC23A-201ENST00000307712 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
SEC23A-201ENST00000307712 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
SEC23A-201ENST00000307712 RBMY1CP0DJD4 496 aa10.11□□□□□ -0.79
SEC23A-201ENST00000307712 TRAV4A0A0B4J268 109 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 HIST1H4AP62805 103 aaKnown RBP10.1□□□□□ -0.79
SEC23A-201ENST00000307712 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 H3BUA1 57 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 HIVEP3Q5T1R4 2406 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 TRIAP1O43715 76 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 INSP01308 110 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 BAALC-AS2P0C853 105 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 DOPEY1Q5JWR5 2465 aa10.1□□□□□ -0.79
SEC23A-201ENST00000307712 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 CRIP2P52943 208 aaPredicted RBP10.09□□□□□ -0.79
SEC23A-201ENST00000307712 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
SEC23A-201ENST00000307712 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 NAV2Q8IVL1 2488 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 TMEM223A0PJW6 202 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 IGHV4-59P01825 116 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 LMO4P61968 165 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 LGALS9O00182 355 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
SEC23A-201ENST00000307712 H3BT86 120 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 HOXD3P31249 432 aaPredicted RBP10.08□□□□□ -0.8
SEC23A-201ENST00000307712 PFN2P35080 140 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 FBXL19-AS1Q494R0 122 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 A8MZ25 164 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 IGHG2P01859 326 aa10.08□□□□□ -0.8
SEC23A-201ENST00000307712 UBE2D3P61077 147 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms