RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TRBV7-1A0A0A6YYK4 115 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 IGHV4-61A0A0C4DH41 118 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 MOB4Q9Y3A3 225 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.97□□□□□ -0.65
PTPN9-201ENST00000306726 IGKV2-29A2NJV5 120 aaPredicted RBP10.97□□□□□ -0.65
PTPN9-201ENST00000306726 GATA3P23771 443 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 TSPEAR-AS2P59090 65 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 PMVKQ15126 192 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 MORN3Q6PF18 240 aaPredicted RBP10.96□□□□□ -0.65
PTPN9-201ENST00000306726 MUSTN1Q8IVN3 82 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 MUC4Q99102 2169 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 SNCGO76070 127 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 TEX29Q8N6K0 151 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 RNF183Q96D59 192 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 MINOS1-NBL1R4GNA1 71 aa10.96□□□□□ -0.65
PTPN9-201ENST00000306726 ID1P41134 155 aa10.96□□□□□ -0.66
PTPN9-201ENST00000306726 XGP55808 180 aa10.96□□□□□ -0.66
PTPN9-201ENST00000306726 HIGD1BQ9P298 99 aa10.96□□□□□ -0.66
PTPN9-201ENST00000306726 ZFHX3Q15911 3703 aa10.95□□□□□ -0.66
PTPN9-201ENST00000306726 ODF3BA8MYP8 253 aa10.95□□□□□ -0.66
PTPN9-201ENST00000306726 VCYO14598 125 aa10.95□□□□□ -0.66
PTPN9-201ENST00000306726 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
PTPN9-201ENST00000306726 SLC25A20O43772 301 aa10.95□□□□□ -0.66
PTPN9-201ENST00000306726 C11orf68Q9H3H3 251 aaKnown RBP10.95□□□□□ -0.66
PTPN9-201ENST00000306726 Q8N1Y9 231 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 C5orf56Q8N8D9 126 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 PRO1854Q9UHT4 67 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 TRAV13-1A0A0B4J241 112 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 OVOL1O14753 267 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 CFHR3Q02985 330 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 CLEC2BQ92478 149 aa10.94□□□□□ -0.66
PTPN9-201ENST00000306726 LYRM7Q5U5X0 104 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 Q9UF83 564 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 TEX15Q9BXT5 2789 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
PTPN9-201ENST00000306726 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 SIRPDQ9H106 197 aa10.93□□□□□ -0.66
PTPN9-201ENST00000306726 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 DEFB131AP59861 70 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 SNRPD3P62318 126 aaKnown RBP10.92□□□□□ -0.66
PTPN9-201ENST00000306726 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 NDUFA11Q86Y39 141 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 ZNRF2Q8NHG8 242 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
PTPN9-201ENST00000306726 RNASE1P07998 156 aaKnown RBP10.92□□□□□ -0.66
PTPN9-201ENST00000306726 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
PTPN9-201ENST00000306726 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 CFC1P0CG37 223 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 LINC01587Q99440 93 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 GAGE2BQ13066 116 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
PTPN9-201ENST00000306726 LMO4P61968 165 aa10.91□□□□□ -0.66
PTPN9-201ENST00000306726 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 APRG1Q8IVJ8 170 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 A0A0J9YY99 117 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 B4DSR2 109 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
PTPN9-201ENST00000306726 KRTAP10-9P60411 292 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 J3QLI3 93 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 PPDPFLQ8WWR9 84 aa10.9□□□□□ -0.66
PTPN9-201ENST00000306726 IGHV1-69DA0A0B4J2H0 117 aa10.89□□□□□ -0.67
PTPN9-201ENST00000306726 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
PTPN9-201ENST00000306726 Q6ZUT4 128 aa10.89□□□□□ -0.67
PTPN9-201ENST00000306726 TIMM21Q9BVV7 248 aa10.89□□□□□ -0.67
PTPN9-201ENST00000306726 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
PTPN9-201ENST00000306726 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
PTPN9-201ENST00000306726 LINC01356Q8N9X3 169 aa10.88□□□□□ -0.67
PTPN9-201ENST00000306726 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
PTPN9-201ENST00000306726 C10orf126Q8N4M7 172 aa10.87□□□□□ -0.67
PTPN9-201ENST00000306726 Q8N6K4 173 aa10.87□□□□□ -0.67
PTPN9-201ENST00000306726 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.67
PTPN9-201ENST00000306726 ELANEP08246 267 aa10.87□□□□□ -0.67
PTPN9-201ENST00000306726 TSHBP01222 138 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 DYNLRB2Q8TF09 96 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 NDUFA12Q9UI09 145 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 CRYGDP07320 174 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 MSMBP08118 114 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 OOSP1A8MZH6 123 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 GPHB5Q86YW7 130 aa10.86□□□□□ -0.67
PTPN9-201ENST00000306726 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
PTPN9-201ENST00000306726 M0R2P5 195 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms