RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 LINC01559Q495D7 138 aa5.88□□□□□ -1.47
SCN9A-201ENST00000303354 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
SCN9A-201ENST00000303354 NUPR1O60356 82 aa5.88□□□□□ -1.47
SCN9A-201ENST00000303354 IGLV2-14P01704 120 aa5.88□□□□□ -1.47
SCN9A-201ENST00000303354 CDPF1Q6NVV7 123 aa5.88□□□□□ -1.47
SCN9A-201ENST00000303354 DOCK10Q96BY6 2186 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 FUSP35637 526 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN9A-201ENST00000303354 A4D1N5 150 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 NREPQ16612 68 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 CHCHD10Q8WYQ3 142 aaPredicted RBP5.87□□□□□ -1.47
SCN9A-201ENST00000303354 ZNF702PQ9H963 129 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 CFC1BP0CG36 223 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 CFC1P0CG37 223 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 COX8AP10176 69 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 CEP290O15078 2479 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 SPTBN2O15020 2390 aa5.87□□□□□ -1.47
SCN9A-201ENST00000303354 AVPP01185 164 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 INSL3P51460 131 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 SH2D6Q7Z4S9 175 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 DENND4AQ7Z401 1863 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 C9orf118A6NHY6 69 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 A8MZ25 164 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 SIVA1O15304 175 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 LINC00467Q9BRT7 94 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 DLEU1O43261 78 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 KRTAP27-1Q3LI81 207 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 ABCA4P78363 2273 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 TNRC6AQ8NDV7 1962 aaKnown RBP5.86□□□□□ -1.47
SCN9A-201ENST00000303354 SPANXA1Q9NS26 97 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 ACYP1P07311 99 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 POU2AF1Q16633 256 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 HERV-K104P63124 156 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 UBE2V1Q13404 147 aa5.86□□□□□ -1.47
SCN9A-201ENST00000303354 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 CT83Q5H943 113 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 TRBV20-1A0A075B6N2 111 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 RBM3P98179 157 aaKnown RBP5.85□□□□□ -1.47
SCN9A-201ENST00000303354 ZNF747Q9BV97 191 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 K7EMT4 169 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 PRO3102Q9H379 93 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 DENND4CQ5VZ89 1909 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 KMT2EQ8IZD2 1858 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 NCKAP5O14513 1909 aa5.85□□□□□ -1.47
SCN9A-201ENST00000303354 EP300Q09472 2414 aaPredicted RBP5.85□□□□□ -1.47
SCN9A-201ENST00000303354 ANAPC1Q9H1A4 1944 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 KPRPQ5T749 579 aaPredicted RBP5.84□□□□□ -1.47
SCN9A-201ENST00000303354 WFDC10BQ8IUB3 73 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 UBE2D3P61077 147 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 ZNF407Q9C0G0 2248 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 CACNA1DQ01668 2161 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 AKAP6Q13023 2319 aa5.84□□□□□ -1.47
SCN9A-201ENST00000303354 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.48
SCN9A-201ENST00000303354 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.48
SCN9A-201ENST00000303354 A0A1W2PPM0 123 aa5.84□□□□□ -1.48
SCN9A-201ENST00000303354 ZFAND2AQ8N6M9 145 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 C7orf33Q8WU49 177 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 C2orf16Q68DN1 1984 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 CFPP27918 469 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 FAM167A-AS1Q96KT0 104 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 PRSS47A8MTI9 375 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 TRAV10A0A0B4J240 114 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 C11orf86A6NJI1 115 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 C11orf71Q6IPW1 123 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 G3V4G9 280 aa5.83□□□□□ -1.48
SCN9A-201ENST00000303354 FBXL19-AS1Q494R0 122 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 LINC00322Q6ZN03 302 aaPredicted RBP5.82□□□□□ -1.48
SCN9A-201ENST00000303354 CADP27708 2225 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 NACAE9PAV3 2078 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 ODF3BA8MYP8 253 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 ZNF106Q9H2Y7 1883 aaKnown RBP5.82□□□□□ -1.48
SCN9A-201ENST00000303354 CEP250Q9BV73 2442 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 A0A1B0GX51 115 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 COX7BP24311 80 aa5.82□□□□□ -1.48
SCN9A-201ENST00000303354 NUP210Q8TEM1 1887 aaPredicted RBP5.81□□□□□ -1.48
SCN9A-201ENST00000303354 NEXN-AS1Q8NBZ9 246 aa5.81□□□□□ -1.48
SCN9A-201ENST00000303354 TOMM6Q96B49 74 aa5.81□□□□□ -1.48
SCN9A-201ENST00000303354 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
SCN9A-201ENST00000303354 RNF152Q8N8N0 203 aa5.81□□□□□ -1.48
SCN9A-201ENST00000303354 IFITM1P13164 125 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 COL4A4P53420 1690 aaPredicted RBP5.8□□□□□ -1.48
SCN9A-201ENST00000303354 C3orf84H3BNL1 204 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 MLST8Q9BVC4 326 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 LY6LH3BQJ8 138 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 CIRBP-AS1Q8TBR5 109 aa5.8□□□□□ -1.48
SCN9A-201ENST00000303354 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 ZGRF1Q86YA3 2104 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 LGALS9O00182 355 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 C1orf158Q8N1D5 194 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 LENEPQ9Y5L5 61 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 EML6Q6ZMW3 1958 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 CFAP126Q5VTH2 177 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 K7EQG2 157 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 PPDPFLQ8WWR9 84 aa5.79□□□□□ -1.48
SCN9A-201ENST00000303354 SPTBN1Q01082 2364 aaKnown RBP5.79□□□□□ -1.48
SCN9A-201ENST00000303354 C14orf177Q52M58 125 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms