RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 COTL1Q14019 142 aa13.3□□□□□ -0.28
TRIM8-201ENST00000302424 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
TRIM8-201ENST00000302424 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
TRIM8-201ENST00000302424 VCYO14598 125 aa13.3□□□□□ -0.28
TRIM8-201ENST00000302424 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
TRIM8-201ENST00000302424 LOC107984156A0A0G2JMH3 177 aa13.29□□□□□ -0.28
TRIM8-201ENST00000302424 ARL17AQ8IVW1 177 aa13.29□□□□□ -0.28
TRIM8-201ENST00000302424 K7EMT4 169 aa13.29□□□□□ -0.28
TRIM8-201ENST00000302424 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
TRIM8-201ENST00000302424 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
TRIM8-201ENST00000302424 K7EQG2 157 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 NXPH4O95158 308 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 RRN3P1Q2M238 152 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 M0QY20 66 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 PMVKQ15126 192 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 C11orf44Q8N8P7 122 aa13.28□□□□□ -0.28
TRIM8-201ENST00000302424 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.28
TRIM8-201ENST00000302424 COX6B1P14854 86 aa13.27□□□□□ -0.28
TRIM8-201ENST00000302424 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.29
TRIM8-201ENST00000302424 TCTEX1D4Q5JR98 221 aa13.27□□□□□ -0.29
TRIM8-201ENST00000302424 LINC01356Q8N9X3 169 aa13.27□□□□□ -0.29
TRIM8-201ENST00000302424 DEFB131AP59861 70 aa13.26□□□□□ -0.29
TRIM8-201ENST00000302424 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
TRIM8-201ENST00000302424 BRI3O95415 125 aa13.26□□□□□ -0.29
TRIM8-201ENST00000302424 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
TRIM8-201ENST00000302424 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
TRIM8-201ENST00000302424 FLNAP21333 2647 aaKnown RBP13.25□□□□□ -0.29
TRIM8-201ENST00000302424 PPP1R17O96001 155 aa13.25□□□□□ -0.29
TRIM8-201ENST00000302424 H7C2G1 150 aa13.24□□□□□ -0.29
TRIM8-201ENST00000302424 TAL2Q16559 108 aa13.24□□□□□ -0.29
TRIM8-201ENST00000302424 POM121L12Q8N7R1 296 aa13.24□□□□□ -0.29
TRIM8-201ENST00000302424 ZNF418Q8TF45 676 aaPredicted RBP13.24□□□□□ -0.29
TRIM8-201ENST00000302424 PSMB2P49721 201 aa13.24□□□□□ -0.29
TRIM8-201ENST00000302424 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 A0A0J9YY99 117 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 LGALS9O00182 355 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 PTH2Q96A98 100 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 TRBV7-9A0A0J9YWB2 115 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 TRBV27A0A0K0K1C4 114 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
TRIM8-201ENST00000302424 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
TRIM8-201ENST00000302424 ZNF702PQ9H963 129 aa13.22□□□□□ -0.29
TRIM8-201ENST00000302424 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
TRIM8-201ENST00000302424 SYT8Q8NBV8 401 aa13.22□□□□□ -0.29
TRIM8-201ENST00000302424 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
TRIM8-201ENST00000302424 TSPAN13O95857 204 aa13.21□□□□□ -0.29
TRIM8-201ENST00000302424 A0A1B0GWB2 263 aa13.21□□□□□ -0.29
TRIM8-201ENST00000302424 Q6ZSN1 163 aa13.21□□□□□ -0.29
TRIM8-201ENST00000302424 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.29
TRIM8-201ENST00000302424 RAX2Q96IS3 184 aa13.21□□□□□ -0.3
TRIM8-201ENST00000302424 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.3
TRIM8-201ENST00000302424 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.3
TRIM8-201ENST00000302424 SPXQ9BT56 116 aa13.21□□□□□ -0.3
TRIM8-201ENST00000302424 SETXQ7Z333 2677 aaKnown RBP13.2□□□□□ -0.3
TRIM8-201ENST00000302424 A0A096LNT2 108 aa13.2□□□□□ -0.3
TRIM8-201ENST00000302424 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
TRIM8-201ENST00000302424 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
TRIM8-201ENST00000302424 A8MZ25 164 aa13.2□□□□□ -0.3
TRIM8-201ENST00000302424 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
TRIM8-201ENST00000302424 UBR5O95071 2799 aaPredicted RBP13.2□□□□□ -0.3
TRIM8-201ENST00000302424 J3QQQ9 107 aa13.2□□□□□ -0.3
TRIM8-201ENST00000302424 CR1P17927 2039 aa13.2□□□□□ -0.3
TRIM8-201ENST00000302424 HERVK_113P61574 105 aa13.2□□□□□ -0.3
TRIM8-201ENST00000302424 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
TRIM8-201ENST00000302424 SMAGPQ0VAQ4 97 aa13.19□□□□□ -0.3
TRIM8-201ENST00000302424 TMEM61Q8N0U2 210 aa13.19□□□□□ -0.3
TRIM8-201ENST00000302424 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
TRIM8-201ENST00000302424 LGALS3P17931 250 aaKnown RBP13.18□□□□□ -0.3
TRIM8-201ENST00000302424 TIMM17AQ99595 171 aa13.18□□□□□ -0.3
TRIM8-201ENST00000302424 PRO0461Q9UI25 63 aa13.18□□□□□ -0.3
TRIM8-201ENST00000302424 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 F8W1H4 67 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 CFC1BP0CG36 223 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 CFC1P0CG37 223 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 NPC2P61916 151 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 TRPT1Q86TN4 253 aaKnown RBP13.17□□□□□ -0.3
TRIM8-201ENST00000302424 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 C20orf203Q8NBC4 194 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 SMCPP49901 116 aaPredicted RBP13.17□□□□□ -0.3
TRIM8-201ENST00000302424 AMELXQ99217 191 aa13.17□□□□□ -0.3
TRIM8-201ENST00000302424 I3L3M4 83 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 GATA3P23771 443 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 VCX2Q9H322 139 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGLV4-3A0A075B6K6 122 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGHV3-30P01768 117 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGHV3-30-5P0DP03 117 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 IGHV4-31P0DP07 118 aa13.16□□□□□ -0.3
TRIM8-201ENST00000302424 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
TRIM8-201ENST00000302424 CD28P10747 220 aa13.15□□□□□ -0.3
TRIM8-201ENST00000302424 Q6YL49 198 aa13.15□□□□□ -0.3
TRIM8-201ENST00000302424 UBE2E2Q96LR5 201 aa13.15□□□□□ -0.3
TRIM8-201ENST00000302424 ZNF22P17026 224 aaPredicted RBP13.15□□□□□ -0.3
TRIM8-201ENST00000302424 AZU1P20160 251 aa13.15□□□□□ -0.3
TRIM8-201ENST00000302424 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
TRIM8-201ENST00000302424 TMEM238LA0A1B0GVL6 79 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms