RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 SPG11Q96JI7 2443 aa17.78■□□□□ 0.44
FOXA3-201ENST00000302177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.78■□□□□ 0.44
FOXA3-201ENST00000302177 UBE2D1P51668 147 aa17.77■□□□□ 0.44
FOXA3-201ENST00000302177 PLEKHB2Q96CS7 222 aa17.77■□□□□ 0.44
FOXA3-201ENST00000302177 VPS13CQ709C8 3753 aa17.77■□□□□ 0.44
FOXA3-201ENST00000302177 AGRNO00468 2067 aa17.77■□□□□ 0.43
FOXA3-201ENST00000302177 A0A0J9YY99 117 aa17.76■□□□□ 0.43
FOXA3-201ENST00000302177 A8MTW9 85 aa17.76■□□□□ 0.43
FOXA3-201ENST00000302177 I3L3M4 83 aa17.76■□□□□ 0.43
FOXA3-201ENST00000302177 KLHL30-AS1Q8NEE0 82 aa17.76■□□□□ 0.43
FOXA3-201ENST00000302177 TRAV2A0A0B4J234 112 aa17.75■□□□□ 0.43
FOXA3-201ENST00000302177 RPL24P83731 157 aaKnown RBP17.75■□□□□ 0.43
FOXA3-201ENST00000302177 C20orf203Q8NBC4 194 aa17.75■□□□□ 0.43
FOXA3-201ENST00000302177 ZNRF2Q8NHG8 242 aa17.75■□□□□ 0.43
FOXA3-201ENST00000302177 TCTEX1D4Q5JR98 221 aa17.74■□□□□ 0.43
FOXA3-201ENST00000302177 P0DMU3 169 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 FAM231AP0DMU4 169 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 FAM231CP0DMU5 169 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 TMEM170BQ5T4T1 132 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 H3BMG7 143 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 PIK3CD-AS1Q5SR53 167 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 SLC25A29Q8N8R3 303 aa17.73■□□□□ 0.43
FOXA3-201ENST00000302177 TEX48A0A1B0GUV7 120 aa17.72■□□□□ 0.43
FOXA3-201ENST00000302177 EMP1P54849 157 aa17.72■□□□□ 0.43
FOXA3-201ENST00000302177 GAGE13Q4V321 117 aa17.72■□□□□ 0.43
FOXA3-201ENST00000302177 Q8N2B8 174 aa17.71■□□□□ 0.43
FOXA3-201ENST00000302177 PGPEP1Q9NXJ5 209 aa17.71■□□□□ 0.43
FOXA3-201ENST00000302177 IGHV4-31P0DP07 118 aa17.71■□□□□ 0.43
FOXA3-201ENST00000302177 Q5PR19 223 aa17.71■□□□□ 0.43
FOXA3-201ENST00000302177 DUX5Q96PT3 197 aa17.71■□□□□ 0.43
FOXA3-201ENST00000302177 NAV2Q8IVL1 2488 aa17.71■□□□□ 0.42
FOXA3-201ENST00000302177 WFDC2Q14508 124 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 MRPL16Q9NX20 251 aaKnown RBP17.7■□□□□ 0.42
FOXA3-201ENST00000302177 CELSR1Q9NYQ6 3014 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 J3QQQ9 107 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 J3QR89 54 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 DEFB104AQ8WTQ1 72 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 PTH2Q96A98 100 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 SPAG8Q99932 426 aaPredicted RBP17.7■□□□□ 0.42
FOXA3-201ENST00000302177 PRO0461Q9UI25 63 aa17.7■□□□□ 0.42
FOXA3-201ENST00000302177 TEX15Q9BXT5 2789 aa17.69■□□□□ 0.42
FOXA3-201ENST00000302177 LEPROTO15243 131 aa17.69■□□□□ 0.42
FOXA3-201ENST00000302177 AMELXQ99217 191 aa17.69■□□□□ 0.42
FOXA3-201ENST00000302177 PYGO1Q9Y3Y4 419 aa17.69■□□□□ 0.42
FOXA3-201ENST00000302177 TMEM223A0PJW6 202 aa17.68■□□□□ 0.42
FOXA3-201ENST00000302177 CRYBA4P53673 196 aa17.68■□□□□ 0.42
FOXA3-201ENST00000302177 LGALS3P17931 250 aaKnown RBP17.68■□□□□ 0.42
FOXA3-201ENST00000302177 TSPEAR-AS2P59090 65 aa17.68■□□□□ 0.42
FOXA3-201ENST00000302177 PDZD2O15018 2839 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 H3BMM0 161 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 IGHV3-30P01768 117 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 IGHV3-30-5P0DP03 117 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 LYRM7Q5U5X0 104 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 MAPK1IP1LQ8NDC0 245 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 PEMTQ9UBM1 199 aa17.67■□□□□ 0.42
FOXA3-201ENST00000302177 RBMY1A1P0DJD3 496 aaKnown RBP17.66■□□□□ 0.42
FOXA3-201ENST00000302177 RBMY1CP0DJD4 496 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 RBMY1FQ15415 496 aaKnown RBP17.66■□□□□ 0.42
FOXA3-201ENST00000302177 NDUFA11Q86Y39 141 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 BEX4Q9NWD9 120 aaPredicted RBP17.66■□□□□ 0.42
FOXA3-201ENST00000302177 MAST4O15021 2626 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 A8MWV9 139 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 DEFB131AP59861 70 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 VCX2Q9H322 139 aa17.66■□□□□ 0.42
FOXA3-201ENST00000302177 DLX4Q92988 240 aaPredicted RBP17.65■□□□□ 0.42
FOXA3-201ENST00000302177 IGLV4-3A0A075B6K6 122 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 KNCNA6PVL3 124 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 TSPAN13O95857 204 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 LINC00467Q9BRT7 94 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 M0R2P5 195 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 SLURP1P55000 103 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 UBE2D3P61077 147 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 UBE2D2P62837 147 aa17.64■□□□□ 0.41
FOXA3-201ENST00000302177 OPRPNQ99935 248 aaPredicted RBP17.64■□□□□ 0.41
FOXA3-201ENST00000302177 RHODO00212 210 aa17.63■□□□□ 0.41
FOXA3-201ENST00000302177 CCDC168Q8NDH2 2452 aa17.63■□□□□ 0.41
FOXA3-201ENST00000302177 ZNF22P17026 224 aaPredicted RBP17.62■□□□□ 0.41
FOXA3-201ENST00000302177 LRRC75A-AS1Q8N1F1 130 aa17.62■□□□□ 0.41
FOXA3-201ENST00000302177 CSPG4Q6UVK1 2322 aa17.62■□□□□ 0.41
FOXA3-201ENST00000302177 C4orf3Q8WVX3 66 aa17.62■□□□□ 0.41
FOXA3-201ENST00000302177 ZNF415Q09FC8 603 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 ETDBQ3ZM63 59 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 ANKRD17O75179 2603 aaKnown RBP17.6■□□□□ 0.41
FOXA3-201ENST00000302177 APOMO95445 188 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 CFC1BP0CG36 223 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 CFC1P0CG37 223 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 DUX3Q96PT4 197 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 TNFRSF18Q9Y5U5 241 aa17.6■□□□□ 0.41
FOXA3-201ENST00000302177 RBMY1BA6NDE4 496 aaKnown RBP17.59■□□□□ 0.41
FOXA3-201ENST00000302177 RBMY1EA6NEQ0 496 aaKnown RBP17.59■□□□□ 0.41
FOXA3-201ENST00000302177 RBMY1DP0C7P1 496 aaKnown RBP17.59■□□□□ 0.41
FOXA3-201ENST00000302177 CFAP126Q5VTH2 177 aa17.59■□□□□ 0.41
FOXA3-201ENST00000302177 C10orf126Q8N4M7 172 aa17.59■□□□□ 0.41
FOXA3-201ENST00000302177 ATP6V0E2Q8NHE4 81 aa17.59■□□□□ 0.41
FOXA3-201ENST00000302177 MAP1AP78559 2803 aaPredicted RBP17.58■□□□□ 0.41
FOXA3-201ENST00000302177 TRBV20-1A0A075B6N2 111 aa17.58■□□□□ 0.4
FOXA3-201ENST00000302177 C18orf65Q6ZTR6 163 aa17.58■□□□□ 0.4
FOXA3-201ENST00000302177 SH2D6Q7Z4S9 175 aa17.58■□□□□ 0.4
FOXA3-201ENST00000302177 TMEM61Q8N0U2 210 aa17.58■□□□□ 0.4
FOXA3-201ENST00000302177 A0A0J9YXV3 536 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms