RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 hDV102S1A0JD36 115 aa16.06■□□□□ 0.16
SMAD1-201ENST00000302085 DEFB104AQ8WTQ1 72 aa16.06■□□□□ 0.16
SMAD1-201ENST00000302085 TOMM6Q96B49 74 aa16.06■□□□□ 0.16
SMAD1-201ENST00000302085 ATP5LO75964 103 aa16.06■□□□□ 0.16
SMAD1-201ENST00000302085 NDUFAF3Q9BU61 184 aa16.06■□□□□ 0.16
SMAD1-201ENST00000302085 P0DMU3 169 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 FAM231AP0DMU4 169 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 FAM231CP0DMU5 169 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 TRGV1A0A0A0MS02 117 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 PLAC8L1A1L4L8 177 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 H7C1H1 209 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 PRSS1P07477 247 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 IGLC3P0DOY3 106 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 DEFA6Q01524 100 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 C2orf66Q6UXQ4 117 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 ZFP2Q6ZN57 461 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 C14orf144Q96I85 54 aa16.04■□□□□ 0.16
SMAD1-201ENST00000302085 KIR2DL4Q99706 377 aa16.03■□□□□ 0.16
SMAD1-201ENST00000302085 DKK2Q9UBU2 259 aa16.03■□□□□ 0.16
SMAD1-201ENST00000302085 RHODO00212 210 aa16.02■□□□□ 0.16
SMAD1-201ENST00000302085 Q6ZTI0 123 aa16.02■□□□□ 0.16
SMAD1-201ENST00000302085 DAZ2Q13117 558 aaKnown RBP16.02■□□□□ 0.15
SMAD1-201ENST00000302085 C16orf74Q96GX8 76 aa16.02■□□□□ 0.15
SMAD1-201ENST00000302085 SCGB3A1Q96QR1 104 aa16.02■□□□□ 0.15
SMAD1-201ENST00000302085 NOP10Q9NPE3 64 aaKnown RBP16.02■□□□□ 0.15
SMAD1-201ENST00000302085 Q9UF83 564 aa16.02■□□□□ 0.15
SMAD1-201ENST00000302085 ODF1Q14990 250 aa16.01■□□□□ 0.15
SMAD1-201ENST00000302085 PRIMA1Q86XR5 153 aa16.01■□□□□ 0.15
SMAD1-201ENST00000302085 WIPF1O43516 503 aa16■□□□□ 0.15
SMAD1-201ENST00000302085 RRN3P1Q2M238 152 aa16■□□□□ 0.15
SMAD1-201ENST00000302085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16■□□□□ 0.15
SMAD1-201ENST00000302085 IGHV3-53P01767 116 aa16■□□□□ 0.15
SMAD1-201ENST00000302085 OR4C5Q8NGB2 326 aa15.99■□□□□ 0.15
SMAD1-201ENST00000302085 HSBP1L1C9JCN9 74 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 I3L3M4 83 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 TSHBP01222 138 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 ZMAT4Q9H898 229 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 UQCR10Q9UDW1 63 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 RIPPLY3P57055 190 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 ZNF479Q96JC4 524 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 OVOL2Q9BRP0 275 aa15.98■□□□□ 0.15
SMAD1-201ENST00000302085 CYSLTR1Q9Y271 337 aa15.97■□□□□ 0.15
SMAD1-201ENST00000302085 TNFRSF18Q9Y5U5 241 aa15.97■□□□□ 0.15
SMAD1-201ENST00000302085 G0S2P27469 103 aa15.96■□□□□ 0.15
SMAD1-201ENST00000302085 ERASQ7Z444 233 aa15.96■□□□□ 0.15
SMAD1-201ENST00000302085 NEXN-AS1Q8NBZ9 246 aa15.96■□□□□ 0.15
SMAD1-201ENST00000302085 Q6ZN92 141 aa15.96■□□□□ 0.15
SMAD1-201ENST00000302085 TP53TG1Q9Y2A0 90 aa15.96■□□□□ 0.15
SMAD1-201ENST00000302085 RPL39P62891 51 aaKnown RBP15.95■□□□□ 0.14
SMAD1-201ENST00000302085 RHOHQ15669 191 aa15.95■□□□□ 0.14
SMAD1-201ENST00000302085 C3orf56Q8N813 242 aa15.95■□□□□ 0.14
SMAD1-201ENST00000302085 A0A087WX48 190 aa15.95■□□□□ 0.14
SMAD1-201ENST00000302085 TRAV4A0A0B4J268 109 aa15.95■□□□□ 0.14
SMAD1-201ENST00000302085 STPG4Q8N801 248 aa15.95■□□□□ 0.14
SMAD1-201ENST00000302085 IGIPA6NJ69 53 aa15.94■□□□□ 0.14
SMAD1-201ENST00000302085 TRAV12-1A0A0B4J245 112 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 DNAJC30Q96LL9 226 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 MRPL35Q9NZE8 188 aaKnown RBP15.93■□□□□ 0.14
SMAD1-201ENST00000302085 GAGE12BA1L429 117 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 GAGE7O76087 117 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 GAGE12FP0CL80 117 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 GAGE12GP0CL81 117 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 GAGE12IP0CL82 117 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 ANKRD39Q53RE8 183 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 BAALCQ8WXS3 180 aa15.93■□□□□ 0.14
SMAD1-201ENST00000302085 LINC01549A6NIU2 74 aa15.92■□□□□ 0.14
SMAD1-201ENST00000302085 SHISA2Q6UWI4 295 aa15.92■□□□□ 0.14
SMAD1-201ENST00000302085 HHLA3Q9XRX5 114 aa15.91■□□□□ 0.14
SMAD1-201ENST00000302085 X6R8D5 127 aa15.91■□□□□ 0.14
SMAD1-201ENST00000302085 DPM2O94777 84 aa15.91■□□□□ 0.14
SMAD1-201ENST00000302085 IGKCP01834 107 aa15.91■□□□□ 0.14
SMAD1-201ENST00000302085 KIR2DL5BQ8NHK3 375 aa15.91■□□□□ 0.14
SMAD1-201ENST00000302085 C20orf203Q8NBC4 194 aa15.9■□□□□ 0.14
SMAD1-201ENST00000302085 TP73-AS1Q9UF72 201 aa15.9■□□□□ 0.14
SMAD1-201ENST00000302085 FBN1P35555 2871 aaKnown RBP15.9■□□□□ 0.14
SMAD1-201ENST00000302085 EMP1P54849 157 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 CTAG1AP78358 180 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 C12orf54Q6X4T0 127 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 TRGV2A0A075B6R0 118 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 PRSS29PA6NIE9 313 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 OXLD1Q5BKU9 147 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 TMEM141Q96I45 108 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 TIMM17AQ99595 171 aa15.89■□□□□ 0.13
SMAD1-201ENST00000302085 SMIM9A6NGZ8 99 aa15.87■□□□□ 0.13
SMAD1-201ENST00000302085 HNRNPA3P51991 378 aaKnown RBP15.87■□□□□ 0.13
SMAD1-201ENST00000302085 APOC4P55056 127 aa15.87■□□□□ 0.13
SMAD1-201ENST00000302085 CHTOPQ9Y3Y2 248 aaKnown RBP15.87■□□□□ 0.13
SMAD1-201ENST00000302085 TRRAPQ9Y4A5 3859 aa15.87■□□□□ 0.13
SMAD1-201ENST00000302085 TCTAP57738 103 aa15.87■□□□□ 0.13
SMAD1-201ENST00000302085 SNHG12Q9BXW3 62 aa15.87■□□□□ 0.13
SMAD1-201ENST00000302085 IGHV3-38A0A0C4DH36 116 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 F8VRH5 84 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 K7EQD1 137 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 COX8AP10176 69 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 SLC25A34Q6PIV7 304 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 SLC25A29Q8N8R3 303 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 ZNRF2Q8NHG8 242 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 PHLDA1Q8WV24 401 aaPredicted RBP15.86■□□□□ 0.13
SMAD1-201ENST00000302085 EREGO14944 169 aa15.86■□□□□ 0.13
SMAD1-201ENST00000302085 ZC2HC1BQ5TFG8 222 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms