RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 WDR73Q6P4I2 378 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 SLC25A29Q8N8R3 303 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 NUP35Q8NFH5 326 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 OR4C5Q8NGB2 326 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 GFRA4Q9GZZ7 299 aa4.09□□□□□ -1.75
SSX3-201ENST00000298396 FAT2Q9NYQ8 4349 aa4.09□□□□□ -1.76
SSX3-201ENST00000298396 A0A1B0GXF2 115 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 A8MWV9 139 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 F2Z2F3 143 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 EVI2AP22794 236 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 CACNG7P62955 275 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 PNRC1Q12796 327 aaPredicted RBP4.08□□□□□ -1.76
SSX3-201ENST00000298396 SPANXN1Q5VSR9 72 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 ATRAIDQ6UW56 229 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 ZFP2Q6ZN57 461 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 C15orf54Q8N8G6 183 aa4.08□□□□□ -1.76
SSX3-201ENST00000298396 A0A096LPF7 62 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 TRGV4A0A0C4DH28 118 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 A0A1B0GUT8 65 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 C7orf77A4D0Y5 90 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 K7EQD1 137 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 GAS8-AS1O95177 125 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 FAM3BP58499 235 aaPredicted RBP4.07□□□□□ -1.76
SSX3-201ENST00000298396 FAM74A4Q5TZK3 123 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 RNF185Q96GF1 192 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 FAM210BQ96KR6 192 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 AP1S3Q96PC3 154 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 PRO0255Q9UI72 69 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 HHLA3Q9XRX5 114 aa4.07□□□□□ -1.76
SSX3-201ENST00000298396 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
SSX3-201ENST00000298396 TRAV26-2A0A0B4J265 109 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 H3BNG1 76 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 RHODO00212 210 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 PPP1R2P9O14990 202 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 NUDT3O95989 172 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 APOC3P02656 99 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 MT-ND4LP03901 98 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 TWIST1Q15672 202 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 SUMO4Q6EEV6 95 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 MRPL54Q6P161 138 aaKnown RBP4.06□□□□□ -1.76
SSX3-201ENST00000298396 NEXN-AS1Q8NBZ9 246 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 NAT8BQ9UHF3 227 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
SSX3-201ENST00000298396 A0A087WWC5 75 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 M0QY20 66 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 CIDEAO60543 219 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 MGPP08493 103 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 TRGC1P0CF51 173 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 RAB4BP61018 213 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 RHEBQ15382 184 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 ZNF56Q15929 161 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 ESRGQ1W209 222 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 C15orf53Q8NAA6 179 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 GATD1Q8NB37 220 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
SSX3-201ENST00000298396 YPEL4Q96NS1 127 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 CTDSP1Q9GZU7 261 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 TMEM191AQ9H0A3 160 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 DPH3P1Q9H4G8 78 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 LINC00588Q9Y4M8 146 aa4.05□□□□□ -1.76
SSX3-201ENST00000298396 LCE6AA0A183 80 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 GAGE12JA6NER3 117 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 SMKR1H3BMG3 65 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 RAB4AP20338 218 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 RPS10P46783 165 aaKnown RBP4.04□□□□□ -1.76
SSX3-201ENST00000298396 TCTAP57738 103 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 TIRAPP58753 221 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 UBE2D3P61077 147 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 UBE2D2P62837 147 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 GAGE1Q13065 139 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 GAGE4Q13068 117 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 GAGE5Q13069 117 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 SLAQ13239 276 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 RHOHQ15669 191 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 NDUFA5Q16718 116 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
SSX3-201ENST00000298396 FAM104BQ5XKR9 115 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 SVBPQ8N300 66 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 IMMP2LQ96T52 175 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 RPS10P5Q9NQ39 176 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 TMEM242Q9NWH2 141 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 ICOSQ9Y6W8 199 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 PKD1P98161 4303 aa4.04□□□□□ -1.76
SSX3-201ENST00000298396 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 SNAPINO95295 136 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 NCR2O95944 276 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 CAMPP49913 170 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 HBBP68871 147 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 RIGQ13278 110 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 MRPL23Q16540 153 aaKnown RBP4.03□□□□□ -1.76
SSX3-201ENST00000298396 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 LGALS9CQ6DKI2 356 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 LYPD5Q6UWN5 251 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 TMEM136Q6ZRR5 245 aa4.03□□□□□ -1.76
SSX3-201ENST00000298396 ATP5L2Q7Z4Y8 100 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms