RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRAV26-1A0A087WT03 109 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 RPL13AP40429 203 aaKnown RBP14.22□□□□□ -0.13
TRA2A-201ENST00000297071 SVIPQ8NHG7 77 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 CITED1Q99966 193 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 USP9XQ93008 2570 aaPredicted RBP14.21□□□□□ -0.13
TRA2A-201ENST00000297071 PTPRQQ9UMZ3 2332 aa14.21□□□□□ -0.13
TRA2A-201ENST00000297071 HRNRQ86YZ3 2850 aaPredicted RBP14.21□□□□□ -0.13
TRA2A-201ENST00000297071 TMEM89A2RUT3 159 aa14.21□□□□□ -0.13
TRA2A-201ENST00000297071 SFTA2Q6UW10 78 aa14.21□□□□□ -0.13
TRA2A-201ENST00000297071 TRAV12-3A0A0B4J271 114 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
TRA2A-201ENST00000297071 IGHV3-11P01762 117 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 SRD5A1P18405 259 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 ZFAND6Q6FIF0 208 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 Q6Q795 121 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 ATMQ13315 3056 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 IGHV1OR15-1A0A075B7D0 117 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 J3QKU1 62 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 MUSTN1Q8IVN3 82 aa14.2□□□□□ -0.14
TRA2A-201ENST00000297071 C9JAW5 83 aa14.19□□□□□ -0.14
TRA2A-201ENST00000297071 ZNF56Q15929 161 aa14.19□□□□□ -0.14
TRA2A-201ENST00000297071 SPANXDQ9BXN6 97 aa14.19□□□□□ -0.14
TRA2A-201ENST00000297071 SPANXCQ9NY87 97 aa14.19□□□□□ -0.14
TRA2A-201ENST00000297071 Q5PR19 223 aa14.18□□□□□ -0.14
TRA2A-201ENST00000297071 TLN1Q9Y490 2541 aaKnown RBP14.18□□□□□ -0.14
TRA2A-201ENST00000297071 A0A0J9YXY3 114 aa14.18□□□□□ -0.14
TRA2A-201ENST00000297071 MRPS36P82909 103 aaKnown RBP14.18□□□□□ -0.14
TRA2A-201ENST00000297071 LINC01620Q4KN68 170 aa14.18□□□□□ -0.14
TRA2A-201ENST00000297071 TENM4Q6N022 2769 aa14.18□□□□□ -0.14
TRA2A-201ENST00000297071 LRBAP50851 2863 aa14.17□□□□□ -0.14
TRA2A-201ENST00000297071 TRGV11A0A075B6L2 103 aa14.17□□□□□ -0.14
TRA2A-201ENST00000297071 TRBV10-2A0A0K0K1G8 114 aa14.17□□□□□ -0.14
TRA2A-201ENST00000297071 PIK3CD-AS1Q5SR53 167 aa14.17□□□□□ -0.14
TRA2A-201ENST00000297071 TEX29Q8N6K0 151 aa14.17□□□□□ -0.14
TRA2A-201ENST00000297071 TRAV2A0A0B4J234 112 aa14.16□□□□□ -0.14
TRA2A-201ENST00000297071 K7EQG2 157 aa14.16□□□□□ -0.14
TRA2A-201ENST00000297071 SNRPD3P62318 126 aaKnown RBP14.16□□□□□ -0.14
TRA2A-201ENST00000297071 H3BUX3 64 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 MRPL23Q16540 153 aaKnown RBP14.15□□□□□ -0.14
TRA2A-201ENST00000297071 Q8N1Y9 231 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 IGKV3-7A0A075B6H7 116 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 FAM74A4Q5TZK3 123 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 BRD3OSQ6XYD6 125 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 LITAFQ99732 161 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 PIMREGQ9BSJ6 248 aa14.15□□□□□ -0.14
TRA2A-201ENST00000297071 A0A0J9YXV3 536 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV4-39P01824 125 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 PRB1P04280 392 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 RAX2Q96IS3 184 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 CLUHP3Q96NS8 147 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
TRA2A-201ENST00000297071 ABCA2Q9BZC7 2435 aa14.13□□□□□ -0.15
TRA2A-201ENST00000297071 TIMM17BO60830 172 aa14.13□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV3-30-3P0DP02 117 aa14.13□□□□□ -0.15
TRA2A-201ENST00000297071 H3BT86 120 aa14.13□□□□□ -0.15
TRA2A-201ENST00000297071 TIMM21Q9BVV7 248 aa14.13□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV3OR16-10A0A075B7F0 116 aa14.12□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV1-58A0A0C4DH39 117 aa14.12□□□□□ -0.15
TRA2A-201ENST00000297071 PSMB8P28062 276 aa14.12□□□□□ -0.15
TRA2A-201ENST00000297071 LY6EQ16553 131 aa14.12□□□□□ -0.15
TRA2A-201ENST00000297071 OPRPNQ99935 248 aaPredicted RBP14.12□□□□□ -0.15
TRA2A-201ENST00000297071 ANAPC13Q9BS18 74 aa14.12□□□□□ -0.15
TRA2A-201ENST00000297071 BLCAPP62952 87 aa14.11□□□□□ -0.15
TRA2A-201ENST00000297071 YAE1D1Q9NRH1 226 aa14.11□□□□□ -0.15
TRA2A-201ENST00000297071 HECTD1Q9ULT8 2610 aa14.11□□□□□ -0.15
TRA2A-201ENST00000297071 TINCRA0A1B0GVN0 87 aa14.11□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV4-38-2P0DP08 117 aa14.11□□□□□ -0.15
TRA2A-201ENST00000297071 PRRC2AP48634 2157 aaKnown RBP14.1□□□□□ -0.15
TRA2A-201ENST00000297071 MYO18BQ8IUG5 2567 aa14.1□□□□□ -0.15
TRA2A-201ENST00000297071 A8MTW9 85 aa14.1□□□□□ -0.15
TRA2A-201ENST00000297071 IFITM1P13164 125 aa14.1□□□□□ -0.15
TRA2A-201ENST00000297071 C10orf105Q8TEF2 133 aa14.1□□□□□ -0.15
TRA2A-201ENST00000297071 NTN5Q8WTR8 489 aaPredicted RBP14.1□□□□□ -0.15
TRA2A-201ENST00000297071 SNCGO76070 127 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 COX6CP09669 75 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 GAGE5Q13069 117 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 GAGE6Q13070 117 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 DEFB121Q5J5C9 76 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 FAM104AQ969W3 186 aa14.09□□□□□ -0.15
TRA2A-201ENST00000297071 IGHV4-61A0A0C4DH41 118 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 TRIAP1O43715 76 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 GAGE2BQ13066 116 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 MIAQ16674 131 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 Q1RN00 199 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 GAGE2EQ4V326 116 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 GAGE2DQ9UEU5 116 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 MED13LQ71F56 2210 aa14.08□□□□□ -0.15
TRA2A-201ENST00000297071 FAM240AA0A1B0GVK7 77 aa14.08□□□□□ -0.16
TRA2A-201ENST00000297071 TGFAP01135 160 aa14.08□□□□□ -0.16
TRA2A-201ENST00000297071 CD28P10747 220 aa14.08□□□□□ -0.16
TRA2A-201ENST00000297071 H3BMM0 161 aa14.07□□□□□ -0.16
TRA2A-201ENST00000297071 ZNF843Q8N446 348 aa14.07□□□□□ -0.16
TRA2A-201ENST00000297071 UBE2WQ96B02 151 aa14.07□□□□□ -0.16
TRA2A-201ENST00000297071 ICOSQ9Y6W8 199 aa14.07□□□□□ -0.16
TRA2A-201ENST00000297071 LAMA5O15230 3695 aa14.07□□□□□ -0.16
TRA2A-201ENST00000297071 TRAV8-4A0A0B4J246 113 aa14.06□□□□□ -0.16
TRA2A-201ENST00000297071 EDN2P20800 178 aa14.06□□□□□ -0.16
TRA2A-201ENST00000297071 VSIG2Q96IQ7 327 aa14.06□□□□□ -0.16
TRA2A-201ENST00000297071 TRAV12-2A0A075B6T6 113 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms