RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF561-AS1K7EIQ3 104 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
HPS3-201ENST00000296051 Q9HAA7 133 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 BUB3O43684 328 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 PLA2G2AP14555 144 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 IGHV4OR15-8A0A075B7B6 117 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 A0A087WW49 117 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 A4D1N5 150 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 GAGE6Q13070 117 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 CPAMD8Q8IZJ3 1885 aa10.31□□□□□ -0.76
HPS3-201ENST00000296051 C15orf53Q8NAA6 179 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 FANCD2OSQ96PS1 177 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 AGRNO00468 2067 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 FOXI1Q12951 378 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 DEFB4AO15263 64 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 EDA2RQ9HAV5 297 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
HPS3-201ENST00000296051 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 CFC1P0CG37 223 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
HPS3-201ENST00000296051 CRYBA4P53673 196 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 HIST1H4AP62805 103 aaKnown RBP10.29□□□□□ -0.76
HPS3-201ENST00000296051 LRRC75A-AS1Q8N1F1 130 aa10.29□□□□□ -0.76
HPS3-201ENST00000296051 IGHV4-31P0DP07 118 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 CLPSL2Q6UWE3 100 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 OPRPNQ99935 248 aaPredicted RBP10.28□□□□□ -0.76
HPS3-201ENST00000296051 RBAKDNA6NC62 111 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 MYCNOSP40205 109 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 LY6G6DO95868 133 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
HPS3-201ENST00000296051 WI2-2373I1.2A0A1W2PRP0 233 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 CARD19Q96LW7 228 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
HPS3-201ENST00000296051 IFITM1P13164 125 aa10.27□□□□□ -0.76
HPS3-201ENST00000296051 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 CEP192Q8TEP8 1941 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 TEN1Q86WV5 123 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 ANKRD29Q8N6D5 301 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 DAND5Q8N907 189 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 WDFY3Q8IZQ1 3526 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 C10orf142B7Z368 130 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
HPS3-201ENST00000296051 IGF1P05019 195 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 INSL3P51460 131 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
HPS3-201ENST00000296051 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 U3KQE9 123 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 TET2Q6N021 2002 aaPredicted RBP10.26□□□□□ -0.77
HPS3-201ENST00000296051 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
HPS3-201ENST00000296051 SPART-AS1P0CW21 52 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 I3L3M4 83 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 C9orf153Q5TBE3 101 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 RASL10AQ92737 203 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 IGHG2P01859 326 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 FREM2Q5SZK8 3169 aa10.25□□□□□ -0.77
HPS3-201ENST00000296051 LINC01548A6NM66 108 aa10.24□□□□□ -0.77
HPS3-201ENST00000296051 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
HPS3-201ENST00000296051 NPBQ8NG41 125 aa10.24□□□□□ -0.77
HPS3-201ENST00000296051 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
HPS3-201ENST00000296051 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
HPS3-201ENST00000296051 CCL18P55774 89 aa10.24□□□□□ -0.77
HPS3-201ENST00000296051 SUMO4Q6EEV6 95 aa10.24□□□□□ -0.77
HPS3-201ENST00000296051 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.23□□□□□ -0.77
HPS3-201ENST00000296051 IGKV2-29A2NJV5 120 aaPredicted RBP10.23□□□□□ -0.77
HPS3-201ENST00000296051 CDSNQ15517 529 aa10.23□□□□□ -0.77
HPS3-201ENST00000296051 TMEM61Q8N0U2 210 aa10.23□□□□□ -0.77
HPS3-201ENST00000296051 LRP4O75096 1905 aa10.23□□□□□ -0.77
HPS3-201ENST00000296051 E9PLD3 99 aa10.23□□□□□ -0.77
HPS3-201ENST00000296051 PFN2P35080 140 aa10.23□□□□□ -0.77
HPS3-201ENST00000296051 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 RNF183Q96D59 192 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 PRSS47A8MTI9 375 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 Q6ZQT7 251 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 RMI2Q96E14 147 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 MUC3AQ02505 3323 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 NXPH4O95158 308 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 ATP5G1P05496 136 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 UNQ9165/PRO28630Q6UXU0 137 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 SMR3AQ99954 134 aa10.22□□□□□ -0.77
HPS3-201ENST00000296051 COL6A3P12111 3177 aa10.21□□□□□ -0.77
HPS3-201ENST00000296051 KRTAP10-9P60411 292 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms