RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PKD1L1Q8TDX9 2849 aa16.38■□□□□ 0.21
PTX3-201ENST00000295927 ZFP2Q6ZN57 461 aa16.37■□□□□ 0.21
PTX3-201ENST00000295927 SPATA12Q7Z6I5 190 aa16.37■□□□□ 0.21
PTX3-201ENST00000295927 K7EMI3 77 aa16.37■□□□□ 0.21
PTX3-201ENST00000295927 VCYO14598 125 aa16.37■□□□□ 0.21
PTX3-201ENST00000295927 DEFB135Q30KP9 77 aa16.37■□□□□ 0.21
PTX3-201ENST00000295927 P0DMU3 169 aa16.36■□□□□ 0.21
PTX3-201ENST00000295927 FAM231AP0DMU4 169 aa16.36■□□□□ 0.21
PTX3-201ENST00000295927 FAM231CP0DMU5 169 aa16.36■□□□□ 0.21
PTX3-201ENST00000295927 ORMDL2Q53FV1 153 aa16.36■□□□□ 0.21
PTX3-201ENST00000295927 S100A12P80511 92 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 ZNF479Q96JC4 524 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 TRAV4A0A0B4J268 109 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 TRBV27A0A0K0K1C4 114 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 SMIM9A6NGZ8 99 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 NUDT3O95989 172 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 IGHV3-53P01767 116 aa16.35■□□□□ 0.21
PTX3-201ENST00000295927 GAGE12BA1L429 117 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 GAGE7O76087 117 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 GAGE12FP0CL80 117 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 GAGE12GP0CL81 117 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 GAGE12IP0CL82 117 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 EMP1P54849 157 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 TEX43Q6ZNM6 134 aa16.34■□□□□ 0.21
PTX3-201ENST00000295927 PCP4L1A6NKN8 68 aa16.33■□□□□ 0.21
PTX3-201ENST00000295927 G3V4G9 280 aa16.33■□□□□ 0.21
PTX3-201ENST00000295927 C18orf15Q96N68 181 aa16.33■□□□□ 0.21
PTX3-201ENST00000295927 ZMAT5Q9UDW3 170 aaKnown RBP16.33■□□□□ 0.21
PTX3-201ENST00000295927 H0Y8G0 127 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 PET117Q6UWS5 81 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 DEFB104AQ8WTQ1 72 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 IFI27L1Q96BM0 104 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 KIR2DL4Q99706 377 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 Q9UF83 564 aa16.33■□□□□ 0.2
PTX3-201ENST00000295927 TRGV2A0A075B6R0 118 aa16.31■□□□□ 0.2
PTX3-201ENST00000295927 NEXN-AS1Q8NBZ9 246 aa16.3■□□□□ 0.2
PTX3-201ENST00000295927 OR11H2Q8NH07 326 aa16.3■□□□□ 0.2
PTX3-201ENST00000295927 TNFRSF18Q9Y5U5 241 aa16.3■□□□□ 0.2
PTX3-201ENST00000295927 NBEAL2Q6ZNJ1 2754 aa16.29■□□□□ 0.2
PTX3-201ENST00000295927 ATOH7Q8N100 152 aa16.29■□□□□ 0.2
PTX3-201ENST00000295927 ZNF664Q8N3J9 261 aa16.29■□□□□ 0.2
PTX3-201ENST00000295927 TOMM6Q96B49 74 aa16.29■□□□□ 0.2
PTX3-201ENST00000295927 MDFIQ99750 246 aa16.29■□□□□ 0.2
PTX3-201ENST00000295927 ANK2Q01484 3957 aa16.28■□□□□ 0.2
PTX3-201ENST00000295927 C20orf202A1L168 122 aa16.28■□□□□ 0.2
PTX3-201ENST00000295927 I3L3M4 83 aa16.28■□□□□ 0.2
PTX3-201ENST00000295927 SAMD5Q5TGI4 173 aa16.27■□□□□ 0.2
PTX3-201ENST00000295927 LINC01545Q5VT33 79 aa16.27■□□□□ 0.2
PTX3-201ENST00000295927 C2orf66Q6UXQ4 117 aa16.27■□□□□ 0.2
PTX3-201ENST00000295927 DNAJC30Q96LL9 226 aa16.27■□□□□ 0.2
PTX3-201ENST00000295927 A8MZ25 164 aa16.27■□□□□ 0.19
PTX3-201ENST00000295927 RNF183Q96D59 192 aa16.27■□□□□ 0.19
PTX3-201ENST00000295927 VAMP8Q9BV40 100 aa16.27■□□□□ 0.19
PTX3-201ENST00000295927 ATP5LO75964 103 aa16.26■□□□□ 0.19
PTX3-201ENST00000295927 TSHBP01222 138 aa16.26■□□□□ 0.19
PTX3-201ENST00000295927 PRO1933Q9H354 126 aa16.26■□□□□ 0.19
PTX3-201ENST00000295927 LINC00612Q8N6U2 182 aa16.25■□□□□ 0.19
PTX3-201ENST00000295927 PMCHL2Q9BQD1 86 aa16.25■□□□□ 0.19
PTX3-201ENST00000295927 K7EQD1 137 aa16.25■□□□□ 0.19
PTX3-201ENST00000295927 CIDEAO60543 219 aa16.25■□□□□ 0.19
PTX3-201ENST00000295927 IGHV4-28A0A0C4DH34 117 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 DEFB130BP0DP73 79 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 DEFB130AP0DP74 79 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 G0S2P27469 103 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 RIPPLY3P57055 190 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 SLC25A29Q8N8R3 303 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 SCGB3A1Q96QR1 104 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 PAM16Q9Y3D7 125 aa16.24■□□□□ 0.19
PTX3-201ENST00000295927 PKIAP61925 76 aa16.23■□□□□ 0.19
PTX3-201ENST00000295927 RHOHQ15669 191 aa16.23■□□□□ 0.19
PTX3-201ENST00000295927 CYSLTR1Q9Y271 337 aa16.23■□□□□ 0.19
PTX3-201ENST00000295927 LGALS9CQ6DKI2 356 aa16.23■□□□□ 0.19
PTX3-201ENST00000295927 TP53TG1Q9Y2A0 90 aa16.23■□□□□ 0.19
PTX3-201ENST00000295927 DEFB4AO15263 64 aa16.22■□□□□ 0.19
PTX3-201ENST00000295927 PRSS1P07477 247 aa16.22■□□□□ 0.19
PTX3-201ENST00000295927 MIFP14174 115 aa16.22■□□□□ 0.19
PTX3-201ENST00000295927 Q8NAQ8 132 aa16.22■□□□□ 0.19
PTX3-201ENST00000295927 DNAH3Q8TD57 4116 aa16.22■□□□□ 0.19
PTX3-201ENST00000295927 TRBV10-1A0A0K0K1A3 114 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.21■□□□□ 0.19
PTX3-201ENST00000295927 MAJINQ3KP22 176 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 FAM222AQ5U5X8 452 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 ZNRF2Q8NHG8 242 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 TRGV4A0A0C4DH28 118 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 LYRM9A8MSI8 78 aa16.21■□□□□ 0.19
PTX3-201ENST00000295927 RPL39P62891 51 aaKnown RBP16.21■□□□□ 0.19
PTX3-201ENST00000295927 TSTD3H0UI37 97 aa16.2■□□□□ 0.18
PTX3-201ENST00000295927 FHL2Q14192 279 aa16.2■□□□□ 0.18
PTX3-201ENST00000295927 ERASQ7Z444 233 aa16.2■□□□□ 0.18
PTX3-201ENST00000295927 TRBV7-3A0A075B6L6 115 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 TRAV9-2A0A087WT02 112 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 LINC01549A6NIU2 74 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 PHLDA1Q8WV24 401 aaPredicted RBP16.19■□□□□ 0.18
PTX3-201ENST00000295927 TRBV6-4A0A1B0GX49 114 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 RPL36AP83881 106 aaKnown RBP16.19■□□□□ 0.18
PTX3-201ENST00000295927 SPATA45Q537H7 98 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 RPL36ALQ969Q0 106 aaKnown RBP16.19■□□□□ 0.18
PTX3-201ENST00000295927 DKK2Q9UBU2 259 aa16.19■□□□□ 0.18
PTX3-201ENST00000295927 IGHV3-38A0A0C4DH36 116 aa16.18■□□□□ 0.18
PTX3-201ENST00000295927 Q6ZN92 141 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms