RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 GAGE4Q13068 117 aa19.28■□□□□ 0.68
CHCHD4-201ENST00000295767 GAGE5Q13069 117 aa19.28■□□□□ 0.68
CHCHD4-201ENST00000295767 GAGE13Q4V321 117 aa19.28■□□□□ 0.68
CHCHD4-201ENST00000295767 FRZBQ92765 325 aa19.28■□□□□ 0.68
CHCHD4-201ENST00000295767 MRAP2Q96G30 205 aa19.28■□□□□ 0.68
CHCHD4-201ENST00000295767 MRPL23Q16540 153 aaKnown RBP19.27■□□□□ 0.68
CHCHD4-201ENST00000295767 SMKR1H3BMG3 65 aa19.26■□□□□ 0.67
CHCHD4-201ENST00000295767 NCR2O95944 276 aa19.26■□□□□ 0.67
CHCHD4-201ENST00000295767 TCTAP57738 103 aa19.26■□□□□ 0.67
CHCHD4-201ENST00000295767 GNB1LQ9BYB4 327 aa19.26■□□□□ 0.67
CHCHD4-201ENST00000295767 TENM2Q9NT68 2774 aa19.26■□□□□ 0.67
CHCHD4-201ENST00000295767 LINC00694P0DN24 101 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 SRIP30626 198 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 RPL36AP83881 106 aaKnown RBP19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 COX19Q49B96 90 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 ZNRF2Q8NHG8 242 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 RPL36ALQ969Q0 106 aaKnown RBP19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 RPL39LQ96EH5 51 aaKnown RBP19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 HLA-DQA1P01909 254 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 NIT2Q9NQR4 276 aa19.25■□□□□ 0.67
CHCHD4-201ENST00000295767 TRBV7-3A0A075B6L6 115 aa19.23■□□□□ 0.67
CHCHD4-201ENST00000295767 RPS10P46783 165 aaKnown RBP19.23■□□□□ 0.67
CHCHD4-201ENST00000295767 CKS2P33552 79 aa19.22■□□□□ 0.67
CHCHD4-201ENST00000295767 DNAJC30Q96LL9 226 aa19.22■□□□□ 0.67
CHCHD4-201ENST00000295767 D6R8Y8 96 aa19.22■□□□□ 0.67
CHCHD4-201ENST00000295767 TNFRSF18Q9Y5U5 241 aa19.22■□□□□ 0.67
CHCHD4-201ENST00000295767 MT-ND6P03923 174 aa19.21■□□□□ 0.67
CHCHD4-201ENST00000295767 UBE2D3P61077 147 aa19.21■□□□□ 0.67
CHCHD4-201ENST00000295767 UBE2D2P62837 147 aa19.21■□□□□ 0.67
CHCHD4-201ENST00000295767 OR10J3Q5JRS4 329 aa19.21■□□□□ 0.67
CHCHD4-201ENST00000295767 NEGR1Q7Z3B1 354 aa19.21■□□□□ 0.67
CHCHD4-201ENST00000295767 NRACQ8N912 160 aa19.2■□□□□ 0.66
CHCHD4-201ENST00000295767 APCSP02743 223 aa19.19■□□□□ 0.66
CHCHD4-201ENST00000295767 ATP6V0E2Q8NHE4 81 aa19.19■□□□□ 0.66
CHCHD4-201ENST00000295767 PPBPP02775 128 aa19.18■□□□□ 0.66
CHCHD4-201ENST00000295767 SH2D6Q7Z4S9 175 aa19.18■□□□□ 0.66
CHCHD4-201ENST00000295767 MRPL18Q9H0U6 180 aaKnown RBP19.18■□□□□ 0.66
CHCHD4-201ENST00000295767 COLCA2A8K830 154 aa19.18■□□□□ 0.66
CHCHD4-201ENST00000295767 ORMDL3Q8N138 153 aa19.18■□□□□ 0.66
CHCHD4-201ENST00000295767 KIAA1644Q3SXP7 199 aa19.17■□□□□ 0.66
CHCHD4-201ENST00000295767 TRAPPC1Q9Y5R8 145 aa19.17■□□□□ 0.66
CHCHD4-201ENST00000295767 TRBV6-5A0A0K0K1A5 114 aa19.16■□□□□ 0.66
CHCHD4-201ENST00000295767 IGHV3-38A0A0C4DH36 116 aa19.15■□□□□ 0.66
CHCHD4-201ENST00000295767 NPYP01303 97 aa19.15■□□□□ 0.66
CHCHD4-201ENST00000295767 ESRGQ1W209 222 aa19.15■□□□□ 0.66
CHCHD4-201ENST00000295767 PRELID3AQ96N28 172 aa19.15■□□□□ 0.66
CHCHD4-201ENST00000295767 PLECQ15149 4684 aaKnown RBP19.15■□□□□ 0.66
CHCHD4-201ENST00000295767 TNFRSF6BO95407 300 aa19.14■□□□□ 0.66
CHCHD4-201ENST00000295767 PPP1R17O96001 155 aa19.14■□□□□ 0.66
CHCHD4-201ENST00000295767 FABP9Q0Z7S8 132 aa19.14■□□□□ 0.66
CHCHD4-201ENST00000295767 LYPD5Q6UWN5 251 aa19.14■□□□□ 0.66
CHCHD4-201ENST00000295767 ST20Q9HBF5 79 aa19.14■□□□□ 0.66
CHCHD4-201ENST00000295767 SDHAF1A6NFY7 115 aa19.14■□□□□ 0.65
CHCHD4-201ENST00000295767 GTSF1LQ9H1H1 148 aa19.13■□□□□ 0.65
CHCHD4-201ENST00000295767 DAZ4Q86SG3 579 aaKnown RBP19.12■□□□□ 0.65
CHCHD4-201ENST00000295767 DAZ3Q9NR90 486 aaKnown RBP19.12■□□□□ 0.65
CHCHD4-201ENST00000295767 TMEM70Q9BUB7 260 aa19.11■□□□□ 0.65
CHCHD4-201ENST00000295767 SUMO2P61956 95 aaKnown RBP19.11■□□□□ 0.65
CHCHD4-201ENST00000295767 LINC00588Q9Y4M8 146 aa19.11■□□□□ 0.65
CHCHD4-201ENST00000295767 PHOX2AO14813 284 aa19.1■□□□□ 0.65
CHCHD4-201ENST00000295767 RAB5AP20339 215 aa19.1■□□□□ 0.65
CHCHD4-201ENST00000295767 CCL18P55774 89 aa19.1■□□□□ 0.65
CHCHD4-201ENST00000295767 LAMTOR2Q9Y2Q5 125 aa19.1■□□□□ 0.65
CHCHD4-201ENST00000295767 POLR2KP53803 58 aaKnown RBP19.09■□□□□ 0.65
CHCHD4-201ENST00000295767 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.09■□□□□ 0.65
CHCHD4-201ENST00000295767 DEFB104AQ8WTQ1 72 aa19.09■□□□□ 0.65
CHCHD4-201ENST00000295767 C20orf78Q9BR46 151 aa19.09■□□□□ 0.65
CHCHD4-201ENST00000295767 TIRAPP58753 221 aa19.08■□□□□ 0.65
CHCHD4-201ENST00000295767 ALKBH7Q9BT30 221 aaPredicted RBP19.07■□□□□ 0.64
CHCHD4-201ENST00000295767 NTM-AS1Q6ZSK4 140 aa19.06■□□□□ 0.64
CHCHD4-201ENST00000295767 UBE2DNLQ8IWF7 75 aa19.06■□□□□ 0.64
CHCHD4-201ENST00000295767 TRBV27A0A0K0K1C4 114 aa19.05■□□□□ 0.64
CHCHD4-201ENST00000295767 MRPS16Q9Y3D3 137 aaKnown RBP19.05■□□□□ 0.64
CHCHD4-201ENST00000295767 I3L3M4 83 aa19.04■□□□□ 0.64
CHCHD4-201ENST00000295767 PMCHP20382 165 aa19.04■□□□□ 0.64
CHCHD4-201ENST00000295767 LELP1Q5T871 98 aa19.04■□□□□ 0.64
CHCHD4-201ENST00000295767 SMIM2Q9BVW6 85 aa19.04■□□□□ 0.64
CHCHD4-201ENST00000295767 TRGC2P03986 189 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 RPL32P62910 135 aaKnown RBP19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 LGALS9CQ6DKI2 356 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 MAP1LC3AQ9H492 121 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 TRBV6-8A0A0A6YYG3 113 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 VCYO14598 125 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 COTL1Q14019 142 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 LINC00476Q8WZB0 136 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 LYSTQ99698 3801 aa19.03■□□□□ 0.64
CHCHD4-201ENST00000295767 LOC389332A0A1B0GUA5 103 aa19.02■□□□□ 0.64
CHCHD4-201ENST00000295767 PRSS47A8MTI9 375 aa19.02■□□□□ 0.64
CHCHD4-201ENST00000295767 TMEM97Q5BJF2 176 aa19.02■□□□□ 0.64
CHCHD4-201ENST00000295767 TSHBP01222 138 aa19■□□□□ 0.63
CHCHD4-201ENST00000295767 UPK3BQ9BT76 320 aa19■□□□□ 0.63
CHCHD4-201ENST00000295767 LY6G6CO95867 125 aa18.99■□□□□ 0.63
CHCHD4-201ENST00000295767 WFDC10BQ8IUB3 73 aa18.99■□□□□ 0.63
CHCHD4-201ENST00000295767 IGLV2-18A0A075B6J9 118 aa18.98■□□□□ 0.63
CHCHD4-201ENST00000295767 KIR2DL4Q99706 377 aa18.98■□□□□ 0.63
CHCHD4-201ENST00000295767 TRBV25-1A0A075B6N4 114 aa18.97■□□□□ 0.63
CHCHD4-201ENST00000295767 TRAV8-6A0A0B4J262 113 aa18.97■□□□□ 0.63
CHCHD4-201ENST00000295767 IGHV1-24A0A0C4DH33 117 aa18.97■□□□□ 0.63
CHCHD4-201ENST00000295767 IQCJQ1A5X6 159 aa18.97■□□□□ 0.63
CHCHD4-201ENST00000295767 ALMS1Q8TCU4 4167 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms