RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HIVEP2P31629 2446 aa9.16□□□□□ -0.94
SYNGAP1-201ENST00000293748 ABCA12Q86UK0 2595 aa9.16□□□□□ -0.94
SYNGAP1-201ENST00000293748 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 E9PLD3 99 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 H3BT86 120 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 GCN1Q92616 2671 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 INAFM1C9JVW0 142 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 I3L2K1 104 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 J3KT08 172 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 DAD1P61803 113 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 CFHR3Q02985 330 aa9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 ANKRD17O75179 2603 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-201ENST00000293748 ELANEP08246 267 aa9.15□□□□□ -0.95
SYNGAP1-201ENST00000293748 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.95
SYNGAP1-201ENST00000293748 K7EIM0 57 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 RS1O15537 224 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 CELSR3Q9NYQ7 3312 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 C11orf1Q9H5F2 150 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 NACAE9PAV3 2078 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 C22orf46C9J442 243 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 CRYGCP07315 174 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 KALRNO60229 2985 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 F5H768 121 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 PSCAO43653 123 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 CTRLP40313 264 aa9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 RPL39LQ96EH5 51 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-201ENST00000293748 C2orf70A6NJV1 201 aa9.13□□□□□ -0.95
SYNGAP1-201ENST00000293748 TTTY13Q9BZ97 58 aa9.13□□□□□ -0.95
SYNGAP1-201ENST00000293748 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
SYNGAP1-201ENST00000293748 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
SYNGAP1-201ENST00000293748 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 A0A1B0GX51 115 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 F6UB75 175 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 ODF1Q14990 250 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 IGLV11-55A0A075B6I3 123 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
SYNGAP1-201ENST00000293748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 IGKV2-29A2NJV5 120 aaPredicted RBP9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 PIFOQ8TCI5 191 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 DYSFO75923 2080 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 SMR3AQ99954 134 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 ATMQ13315 3056 aa9.11□□□□□ -0.95
SYNGAP1-201ENST00000293748 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 C19orf71A6NCJ1 209 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 ZFP36P26651 326 aaKnown RBP9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 NPBQ8NG41 125 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 BUB3O43684 328 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 FRMD6-AS1P0C7T7 363 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 U3KQE9 123 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 CTSGP08311 255 aa9.1□□□□□ -0.95
SYNGAP1-201ENST00000293748 FLNCQ14315 2725 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 A0A1B0GXF2 115 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 ATP5G1P05496 136 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 hADV29S1A0JD25 119 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 H3BQ85 93 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 POLQO75417 2590 aa9.09□□□□□ -0.95
SYNGAP1-201ENST00000293748 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.96
SYNGAP1-201ENST00000293748 NDUFC2O95298 119 aa9.09□□□□□ -0.96
SYNGAP1-201ENST00000293748 WI2-2373I1.2A0A1W2PRP0 233 aa9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 JMJD7-PLA2G4BH0Y9G9 81 aa9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 OPRPNQ99935 248 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGHV7-81A0A0B4J1V7 117 aa9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 PSMB8P28062 276 aa9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 CSPG4Q6UVK1 2322 aa9.08□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 CENPVL3A0A0U1RRI6 287 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGHG2P01859 326 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 FUSP35637 526 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 XCL1P47992 114 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 SPRY2O43597 315 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 APOC4P55056 127 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 RMI2Q96E14 147 aa9.07□□□□□ -0.96
SYNGAP1-201ENST00000293748 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 LINC00643Q86TS7 51 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 LGALS9O00182 355 aa9.06□□□□□ -0.96
SYNGAP1-201ENST00000293748 P0C879 139 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms