RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 IGHV3-64A0A075B6Q5 118 aa14.18□□□□□ -0.14
LSM12-201ENST00000293406 A4D1N5 150 aa14.18□□□□□ -0.14
LSM12-201ENST00000293406 A8MWV9 139 aa14.18□□□□□ -0.14
LSM12-201ENST00000293406 AVPP01185 164 aa14.18□□□□□ -0.14
LSM12-201ENST00000293406 C10orf99Q6UWK7 81 aa14.18□□□□□ -0.14
LSM12-201ENST00000293406 RHODO00212 210 aa14.17□□□□□ -0.14
LSM12-201ENST00000293406 ZNF22P17026 224 aaPredicted RBP14.17□□□□□ -0.14
LSM12-201ENST00000293406 SBSPONQ8IVN8 264 aa14.17□□□□□ -0.14
LSM12-201ENST00000293406 CARD19Q96LW7 228 aa14.17□□□□□ -0.14
LSM12-201ENST00000293406 VCX2Q9H322 139 aa14.16□□□□□ -0.14
LSM12-201ENST00000293406 TRAV2A0A0B4J234 112 aa14.16□□□□□ -0.14
LSM12-201ENST00000293406 IGLV4-3A0A075B6K6 122 aa14.15□□□□□ -0.14
LSM12-201ENST00000293406 A0A0J9YXV3 536 aa14.15□□□□□ -0.14
LSM12-201ENST00000293406 FHL3Q13643 280 aa14.15□□□□□ -0.14
LSM12-201ENST00000293406 TCTEX1D4Q5JR98 221 aa14.15□□□□□ -0.14
LSM12-201ENST00000293406 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
LSM12-201ENST00000293406 IGHV4-59P01825 116 aa14.14□□□□□ -0.15
LSM12-201ENST00000293406 SYNJ2BPP57105 145 aa14.14□□□□□ -0.15
LSM12-201ENST00000293406 TRGV11A0A075B6L2 103 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 B4DSR2 109 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 IGHV3-33P01772 117 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 CKS1BP61024 79 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 TMEM263Q8WUH6 116 aaKnown RBP14.13□□□□□ -0.15
LSM12-201ENST00000293406 SPINK8P0C7L1 97 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 CRYBA4P53673 196 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 ERG28Q9UKR5 140 aa14.13□□□□□ -0.15
LSM12-201ENST00000293406 A0A0B4J2C4 111 aa14.12□□□□□ -0.15
LSM12-201ENST00000293406 EIF4EBP3O60516 100 aaPredicted RBP14.12□□□□□ -0.15
LSM12-201ENST00000293406 ANKRD29Q8N6D5 301 aa14.12□□□□□ -0.15
LSM12-201ENST00000293406 H7C2G1 150 aa14.12□□□□□ -0.15
LSM12-201ENST00000293406 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
LSM12-201ENST00000293406 DEFB112Q30KQ8 113 aa14.11□□□□□ -0.15
LSM12-201ENST00000293406 Q6ZUT4 128 aa14.11□□□□□ -0.15
LSM12-201ENST00000293406 MT-ATP8P03928 68 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 SLC25A20O43772 301 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 XGP55808 180 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 DUX5Q96PT3 197 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 PRORYQ9H606 182 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 NCOR2Q9Y618 2525 aa14.1□□□□□ -0.15
LSM12-201ENST00000293406 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.09□□□□□ -0.15
LSM12-201ENST00000293406 M0R2P5 195 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 CD28P10747 220 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 SPXQ9BT56 116 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 ITPR1Q14643 2758 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 MAP1AP78559 2803 aaPredicted RBP14.09□□□□□ -0.15
LSM12-201ENST00000293406 IGHV3-73A0A0B4J1V6 119 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 A0A0J9YXY3 114 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 C9JAW5 83 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 HTN1P15515 57 aa14.09□□□□□ -0.15
LSM12-201ENST00000293406 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.157e-13■■■□□ 14.9
LSM12-201ENST00000293406 IGHV3-30-3P0DP02 117 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 RNF152Q8N8N0 203 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 TIMM21Q9BVV7 248 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 PYGO1Q9Y3Y4 419 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 CHD8Q9HCK8 2581 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 GATA3P23771 443 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 Q1RN00 199 aa14.08□□□□□ -0.16
LSM12-201ENST00000293406 RBMY1A1P0DJD3 496 aaKnown RBP14.07□□□□□ -0.16
LSM12-201ENST00000293406 RBMY1CP0DJD4 496 aa14.07□□□□□ -0.16
LSM12-201ENST00000293406 RBMY1FQ15415 496 aaKnown RBP14.07□□□□□ -0.16
LSM12-201ENST00000293406 CRYBG3Q68DQ2 2970 aa14.07□□□□□ -0.16
LSM12-201ENST00000293406 EDA2RQ9HAV5 297 aa14.07□□□□□ -0.16
LSM12-201ENST00000293406 SPTBN4Q9H254 2564 aa14.06□□□□□ -0.16
LSM12-201ENST00000293406 ADARB2-AS1A8MUL3 147 aa14.06□□□□□ -0.16
LSM12-201ENST00000293406 HOXD3P31249 432 aaPredicted RBP14.06□□□□□ -0.16
LSM12-201ENST00000293406 PROK1P58294 105 aa14.06□□□□□ -0.16
LSM12-201ENST00000293406 MRPS36P82909 103 aaKnown RBP14.06□□□□□ -0.16
LSM12-201ENST00000293406 CELSR2Q9HCU4 2923 aa14.06□□□□□ -0.16
LSM12-201ENST00000293406 M0QXV9 152 aa14.06□□□□□ -0.16
LSM12-201ENST00000293406 CEMP1Q6PRD7 247 aaPredicted RBP14.05□□□□□ -0.16
LSM12-201ENST00000293406 FAM104AQ969W3 186 aa14.05□□□□□ -0.16
LSM12-201ENST00000293406 TNFRSF18Q9Y5U5 241 aa14.05□□□□□ -0.16
LSM12-201ENST00000293406 KNCNA6PVL3 124 aa14.04□□□□□ -0.16
LSM12-201ENST00000293406 TRAV8-3A0A0A6YYJ7 113 aa14.04□□□□□ -0.16
LSM12-201ENST00000293406 TMEM262E9PQX1 116 aa14.04□□□□□ -0.16
LSM12-201ENST00000293406 GEMIN7Q9H840 131 aaKnown RBP14.04□□□□□ -0.16
LSM12-201ENST00000293406 ATXN8Q156A1 80 aa14.03□□□□□ -0.16
LSM12-201ENST00000293406 RNASE13Q5GAN3 156 aaKnown RBP14.03□□□□□ -0.16
LSM12-201ENST00000293406 DOPEY2Q9Y3R5 2298 aa14.03□□□□□ -0.16
LSM12-201ENST00000293406 SPG11Q96JI7 2443 aa14.03□□□□□ -0.16
LSM12-201ENST00000293406 CSPG4Q6UVK1 2322 aa14.03□□□□□ -0.16
LSM12-201ENST00000293406 LITAFQ99732 161 aa14.03□□□□□ -0.16
LSM12-201ENST00000293406 IGHV1-58A0A0C4DH39 117 aa14.02□□□□□ -0.16
LSM12-201ENST00000293406 PRSS2P07478 247 aa14.02□□□□□ -0.16
LSM12-201ENST00000293406 ELANEP08246 267 aa14.02□□□□□ -0.16
LSM12-201ENST00000293406 SORL1Q92673 2214 aa14.02□□□□□ -0.17
LSM12-201ENST00000293406 DEFB131AP59861 70 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 UBE2E2Q96LR5 201 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 DUX3Q96PT4 197 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 BEX4Q9NWD9 120 aaPredicted RBP14.01□□□□□ -0.17
LSM12-201ENST00000293406 LINC01620Q4KN68 170 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 LINC01356Q8N9X3 169 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 NDUFA12Q9UI09 145 aa14.01□□□□□ -0.17
LSM12-201ENST00000293406 TRBV30A0A0K0K1B3 111 aa14□□□□□ -0.17
LSM12-201ENST00000293406 PRM2P04554 102 aa14□□□□□ -0.17
LSM12-201ENST00000293406 DSCR9P59020 149 aa14□□□□□ -0.17
LSM12-201ENST00000293406 Q9UF83 564 aa13.99□□□□□ -0.17
LSM12-201ENST00000293406 TINCRA0A1B0GVN0 87 aa13.99□□□□□ -0.17
LSM12-201ENST00000293406 TRIAP1O43715 76 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms