RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MORN3Q6PF18 240 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-201ENST00000279247 M0QY20 66 aa13.09□□□□□ -0.31
CAPN1-201ENST00000279247 COX8AP10176 69 aa13.09□□□□□ -0.31
CAPN1-201ENST00000279247 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
CAPN1-201ENST00000279247 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.31
CAPN1-201ENST00000279247 PPP1R17O96001 155 aa13.08□□□□□ -0.32
CAPN1-201ENST00000279247 DPM2O94777 84 aa13.08□□□□□ -0.32
CAPN1-201ENST00000279247 COL5A1-AS1Q5SY13 56 aa13.08□□□□□ -0.32
CAPN1-201ENST00000279247 JMJD8Q96S16 334 aa13.08□□□□□ -0.32
CAPN1-201ENST00000279247 ZNF415Q09FC8 603 aa13.07□□□□□ -0.32
CAPN1-201ENST00000279247 ZFP2Q6ZN57 461 aa13.07□□□□□ -0.32
CAPN1-201ENST00000279247 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
CAPN1-201ENST00000279247 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
CAPN1-201ENST00000279247 VCYO14598 125 aa13.07□□□□□ -0.32
CAPN1-201ENST00000279247 POLR2KP53803 58 aaKnown RBP13.07□□□□□ -0.32
CAPN1-201ENST00000279247 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-201ENST00000279247 TRAV25A0A0B4J276 109 aa13.06□□□□□ -0.32
CAPN1-201ENST00000279247 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
CAPN1-201ENST00000279247 HHLA3Q9XRX5 114 aa13.06□□□□□ -0.32
CAPN1-201ENST00000279247 M0R2P5 195 aa13.06□□□□□ -0.32
CAPN1-201ENST00000279247 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-201ENST00000279247 CYSLTR1Q9Y271 337 aa13.06□□□□□ -0.32
CAPN1-201ENST00000279247 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 Q6ZSN1 163 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 C1orf158Q8N1D5 194 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 SPATA3Q8NHX4 192 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 A8MTW9 85 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 POM121L12Q8N7R1 296 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
CAPN1-201ENST00000279247 A0A087WX48 190 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
CAPN1-201ENST00000279247 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
CAPN1-201ENST00000279247 STAB1Q9NY15 2570 aa13.04□□□□□ -0.32
CAPN1-201ENST00000279247 C2orf91Q6ZV80 131 aa13.04□□□□□ -0.32
CAPN1-201ENST00000279247 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
CAPN1-201ENST00000279247 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
CAPN1-201ENST00000279247 NDUFA7O95182 113 aa13.04□□□□□ -0.32
CAPN1-201ENST00000279247 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
CAPN1-201ENST00000279247 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
CAPN1-201ENST00000279247 CRLF1O75462 422 aa13.03□□□□□ -0.32
CAPN1-201ENST00000279247 FGF6P10767 208 aa13.03□□□□□ -0.32
CAPN1-201ENST00000279247 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
CAPN1-201ENST00000279247 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
CAPN1-201ENST00000279247 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.32
CAPN1-201ENST00000279247 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 TRBV27A0A0K0K1C4 114 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 F8VRH5 84 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 H7C1H1 209 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 NEXN-AS1Q8NBZ9 246 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 TNFRSF18Q9Y5U5 241 aa13.01□□□□□ -0.33
CAPN1-201ENST00000279247 TSHBP01222 138 aa13□□□□□ -0.33
CAPN1-201ENST00000279247 BVES-AS1Q5T3Y7 98 aa13□□□□□ -0.33
CAPN1-201ENST00000279247 LURAP1LQ8IV03 231 aa13□□□□□ -0.33
CAPN1-201ENST00000279247 MRPL52Q86TS9 123 aaKnown RBP13□□□□□ -0.33
CAPN1-201ENST00000279247 Q6ZTI0 123 aa12.99□□□□□ -0.33
CAPN1-201ENST00000279247 BOD1L2Q8IYS8 172 aa12.99□□□□□ -0.33
CAPN1-201ENST00000279247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-201ENST00000279247 A8MWV9 139 aa12.99□□□□□ -0.33
CAPN1-201ENST00000279247 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
CAPN1-201ENST00000279247 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-201ENST00000279247 NOP10Q9NPE3 64 aaKnown RBP12.99□□□□□ -0.33
CAPN1-201ENST00000279247 I3L3M4 83 aa12.98□□□□□ -0.33
CAPN1-201ENST00000279247 TRBV6-5A0A0K0K1A5 114 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 K7EMI3 77 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 FOSL1P15407 271 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-201ENST00000279247 PLNP26678 52 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 C12orf54Q6X4T0 127 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 RIPPLY3P57055 190 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
CAPN1-201ENST00000279247 IGIPA6NJ69 53 aa12.96□□□□□ -0.33
CAPN1-201ENST00000279247 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.33
CAPN1-201ENST00000279247 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
CAPN1-201ENST00000279247 TMEM97Q5BJF2 176 aa12.96□□□□□ -0.34
CAPN1-201ENST00000279247 K7EP13 123 aa12.95□□□□□ -0.34
CAPN1-201ENST00000279247 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
CAPN1-201ENST00000279247 LINC00482Q8N8I6 264 aa12.95□□□□□ -0.34
CAPN1-201ENST00000279247 TMEM170BQ5T4T1 132 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 NAA38Q9BRA0 125 aaKnown RBP12.94□□□□□ -0.34
CAPN1-201ENST00000279247 SPXQ9BT56 116 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 RNASE8Q8TDE3 154 aaKnown RBP12.94□□□□□ -0.34
CAPN1-201ENST00000279247 GAGE12BA1L429 117 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 GAGE7O76087 117 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
CAPN1-201ENST00000279247 BEAN1Q3B7T3 259 aa12.94□□□□□ -0.34
CAPN1-201ENST00000279247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-201ENST00000279247 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-201ENST00000279247 NPSP0C0P6 89 aa12.93□□□□□ -0.34
CAPN1-201ENST00000279247 GCSHP23434 173 aa12.93□□□□□ -0.34
CAPN1-201ENST00000279247 PMVKQ15126 192 aa12.93□□□□□ -0.34
CAPN1-201ENST00000279247 UFSP1Q6NVU6 142 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms