RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MRPL54Q6P161 138 aaKnown RBP8.73□□□□□ -1.01
SS18-202ENST00000269138 WFDC10BQ8IUB3 73 aa8.73□□□□□ -1.01
SS18-202ENST00000269138 TMEM191AQ9H0A3 160 aa8.73□□□□□ -1.01
SS18-202ENST00000269138 DNAH6Q9C0G6 4158 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 IGHV3-38A0A0C4DH36 116 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 CAMPP49913 170 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 RASL11AQ6T310 242 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
SS18-202ENST00000269138 H7C1H1 209 aa8.71□□□□□ -1.01
SS18-202ENST00000269138 Q6ZR54 194 aa8.71□□□□□ -1.01
SS18-202ENST00000269138 AMN1Q8IY45 258 aa8.71□□□□□ -1.01
SS18-202ENST00000269138 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 SIVA1O15304 175 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 RAB4AP20338 218 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 LELP1Q5T871 98 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 CLRN3Q8NCR9 226 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
SS18-202ENST00000269138 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 NIT2Q9NQR4 276 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 OR10J3Q5JRS4 329 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 DNAJC30Q96LL9 226 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
SS18-202ENST00000269138 A0A1B0GW15 77 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 APOC3P02656 99 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 HBBP68871 147 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
SS18-202ENST00000269138 TRAV8-6A0A0B4J262 113 aa8.68□□□□□ -1.02
SS18-202ENST00000269138 NCR2O95944 276 aa8.68□□□□□ -1.02
SS18-202ENST00000269138 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
SS18-202ENST00000269138 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
SS18-202ENST00000269138 A0A087WWC5 75 aa8.67□□□□□ -1.02
SS18-202ENST00000269138 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
SS18-202ENST00000269138 MRPL51Q4U2R6 128 aaKnown RBP8.67□□□□□ -1.02
SS18-202ENST00000269138 ATP5L2Q7Z4Y8 100 aa8.67□□□□□ -1.02
SS18-202ENST00000269138 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
SS18-202ENST00000269138 Q8N3U1 123 aa8.67□□□□□ -1.02
SS18-202ENST00000269138 IMMP2LQ96T52 175 aa8.67□□□□□ -1.02
SS18-202ENST00000269138 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
SS18-202ENST00000269138 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
SS18-202ENST00000269138 RHEBQ15382 184 aa8.66□□□□□ -1.02
SS18-202ENST00000269138 MRAP2Q96G30 205 aa8.66□□□□□ -1.02
SS18-202ENST00000269138 BTF3L4Q96K17 158 aa8.66□□□□□ -1.02
SS18-202ENST00000269138 TRBV6-8A0A0A6YYG3 113 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 IGHV3-30P01768 117 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 IGHV3-33P01772 117 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 S100A8P05109 93 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 IGHV3-30-3P0DP02 117 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 IGHV3-30-5P0DP03 117 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 FRZBQ92765 325 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 URGCP-MRPS24S4R325 110 aa8.65□□□□□ -1.02
SS18-202ENST00000269138 NDUFA5Q16718 116 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 SVBPQ8N300 66 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 NRACQ8N912 160 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 RTL8CO15255 209 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
SS18-202ENST00000269138 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
SS18-202ENST00000269138 SNAPINO95295 136 aa8.63□□□□□ -1.03
SS18-202ENST00000269138 CKS2P33552 79 aa8.63□□□□□ -1.03
SS18-202ENST00000269138 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
SS18-202ENST00000269138 NIT1Q86X76 327 aa8.63□□□□□ -1.03
SS18-202ENST00000269138 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
SS18-202ENST00000269138 D6R8Y8 96 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 S100PP25815 95 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 TMEM97Q5BJF2 176 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 C6orf223Q8N319 242 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
SS18-202ENST00000269138 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 IGHV1-24A0A0C4DH33 117 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
SS18-202ENST00000269138 COTL1Q14019 142 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 IQCJQ1A5X6 159 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 TMEM136Q6ZRR5 245 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
SS18-202ENST00000269138 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
SS18-202ENST00000269138 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
SS18-202ENST00000269138 PMCHP20382 165 aa8.6□□□□□ -1.03
SS18-202ENST00000269138 GAGE6Q13070 117 aa8.6□□□□□ -1.03
SS18-202ENST00000269138 DNAH2Q9P225 4427 aa8.6□□□□□ -1.03
SS18-202ENST00000269138 I3L3M4 83 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 TNFRSF6BO95407 300 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 TSHBP01222 138 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 NPYP01303 97 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 AMTP48728 403 aa8.59□□□□□ -1.03
SS18-202ENST00000269138 SUMO2P61956 95 aaKnown RBP8.59□□□□□ -1.03
SS18-202ENST00000269138 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms