RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 F5H697 171 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 SYS1-DBNDD2H3BUS1 97 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
COPS3-201ENST00000268717 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 KIR2DL5BQ8NHK3 375 aa11.08□□□□□ -0.64
COPS3-201ENST00000268717 IGHV3OR16-12A0A075B7B8 117 aa11.07□□□□□ -0.64
COPS3-201ENST00000268717 C20orf202A1L168 122 aa11.07□□□□□ -0.64
COPS3-201ENST00000268717 RS1O15537 224 aa11.07□□□□□ -0.64
COPS3-201ENST00000268717 CFAP126Q5VTH2 177 aa11.07□□□□□ -0.64
COPS3-201ENST00000268717 LINC01549A6NIU2 74 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 K7EIL1 84 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 LINC00173Q6ZV60 143 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 ZMAT5Q9UDW3 170 aaKnown RBP11.06□□□□□ -0.64
COPS3-201ENST00000268717 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 VCYO14598 125 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 TCAPO15273 167 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 G0S2P27469 103 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 PKIAP61925 76 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 RRN3P1Q2M238 152 aa11.06□□□□□ -0.64
COPS3-201ENST00000268717 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
COPS3-201ENST00000268717 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
COPS3-201ENST00000268717 CIDEAO60543 219 aa11.04□□□□□ -0.64
COPS3-201ENST00000268717 APOC4P55056 127 aa11.04□□□□□ -0.64
COPS3-201ENST00000268717 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
COPS3-201ENST00000268717 MRPL16Q9NX20 251 aaKnown RBP11.04□□□□□ -0.64
COPS3-201ENST00000268717 PLAC8L1A1L4L8 177 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 KIR2DL4Q99706 377 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 DNAH9Q9NYC9 4486 aa11.03□□□□□ -0.64
COPS3-201ENST00000268717 ATP5LO75964 103 aa11.02□□□□□ -0.64
COPS3-201ENST00000268717 VAMP8Q9BV40 100 aa11.02□□□□□ -0.64
COPS3-201ENST00000268717 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 NUDT3O95989 172 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 LGALS9CQ6DKI2 356 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
COPS3-201ENST00000268717 PCP4L1A6NKN8 68 aa11.01□□□□□ -0.65
COPS3-201ENST00000268717 RHOHQ15669 191 aa11□□□□□ -0.65
COPS3-201ENST00000268717 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
COPS3-201ENST00000268717 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
COPS3-201ENST00000268717 DEFB121Q5J5C9 76 aa10.99□□□□□ -0.65
COPS3-201ENST00000268717 Q6ZTI0 123 aa10.99□□□□□ -0.65
COPS3-201ENST00000268717 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 I3L3M4 83 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 C18orf15Q96N68 181 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 COL7A1Q02388 2944 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 TRBV10-1A0A0K0K1A3 114 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 C2orf66Q6UXQ4 117 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 X6R8D5 127 aa10.98□□□□□ -0.65
COPS3-201ENST00000268717 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
COPS3-201ENST00000268717 A8MZ25 164 aa10.97□□□□□ -0.65
COPS3-201ENST00000268717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.97□□□□□ -0.65
COPS3-201ENST00000268717 LINC00612Q8N6U2 182 aa10.97□□□□□ -0.65
COPS3-201ENST00000268717 CYSLTR1Q9Y271 337 aa10.97□□□□□ -0.65
COPS3-201ENST00000268717 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
COPS3-201ENST00000268717 NACAE9PAV3 2078 aa10.96□□□□□ -0.65
COPS3-201ENST00000268717 IGHV4-30-4P0DP06 118 aa10.96□□□□□ -0.65
COPS3-201ENST00000268717 Q6ZSN1 163 aa10.96□□□□□ -0.65
COPS3-201ENST00000268717 NEXN-AS1Q8NBZ9 246 aa10.96□□□□□ -0.65
COPS3-201ENST00000268717 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
COPS3-201ENST00000268717 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 TSHBP01222 138 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 SPATA45Q537H7 98 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 ERASQ7Z444 233 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 ZNF479Q96JC4 524 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 SCGB3A1Q96QR1 104 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 TIMM17AQ99595 171 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 ZMAT4Q9H898 229 aa10.95□□□□□ -0.66
COPS3-201ENST00000268717 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 H0Y8G0 127 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 K7EQD1 137 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 DDTP30046 118 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 ODF1Q14990 250 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 Q6ZN92 141 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 ATOH7Q8N100 152 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 B9D2Q9BPU9 175 aa10.94□□□□□ -0.66
COPS3-201ENST00000268717 GAGE12BA1L429 117 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 LYRM9A8MSI8 78 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 GAGE7O76087 117 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 PRSS1P07477 247 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 GAGE12FP0CL80 117 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 GAGE12GP0CL81 117 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 GAGE12IP0CL82 117 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 P0DMU3 169 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 TMEM141Q96I45 108 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
COPS3-201ENST00000268717 TRBV6-4A0A1B0GX49 114 aa10.92□□□□□ -0.66
COPS3-201ENST00000268717 MIFP14174 115 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms