RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 NFE4Q86UQ8 179 aa16.39■□□□□ 0.21
CDR2-201ENST00000268383 FBN2P35556 2912 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 K7EMT4 169 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 IGHV3-30P01768 117 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 IGHV3-30-5P0DP03 117 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 CFAP126Q5VTH2 177 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 DLX4Q92988 240 aaPredicted RBP16.38■□□□□ 0.21
CDR2-201ENST00000268383 AMELXQ99217 191 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 TIMM17AQ99595 171 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 TMEM141Q96I45 108 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 NOTCH3Q9UM47 2321 aa16.38■□□□□ 0.21
CDR2-201ENST00000268383 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 TLN2Q9Y4G6 2542 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 J3QQQ9 107 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 J3QR89 54 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 NDUFS8O00217 210 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 PROK1P58294 105 aa16.37■□□□□ 0.21
CDR2-201ENST00000268383 RPL32P62910 135 aaKnown RBP16.37■□□□□ 0.21
CDR2-201ENST00000268383 TCL1BO95988 128 aa16.36■□□□□ 0.21
CDR2-201ENST00000268383 HIST2H2BDQ6DRA6 164 aa16.36■□□□□ 0.21
CDR2-201ENST00000268383 PRORYQ9H606 182 aa16.36■□□□□ 0.21
CDR2-201ENST00000268383 IGHV1OR15-1A0A075B7D0 117 aa16.35■□□□□ 0.21
CDR2-201ENST00000268383 Q9UF83 564 aa16.35■□□□□ 0.21
CDR2-201ENST00000268383 TEX15Q9BXT5 2789 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 H7C2G1 150 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 SNRPD3P62318 126 aaKnown RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 RNASE13Q5GAN3 156 aaKnown RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 PAPPA-AS1Q5QFB9 102 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 SLC25A29Q8N8R3 303 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 RAX2Q96IS3 184 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 A0A0J9YXV3 536 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 ADARB2-AS1A8MUL3 147 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 K7EQG2 157 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 RBMY1A1P0DJD3 496 aaKnown RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 RBMY1CP0DJD4 496 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 LGALS3P17931 250 aaKnown RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 UBE2D3P61077 147 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 UBE2D2P62837 147 aa16.34■□□□□ 0.21
CDR2-201ENST00000268383 RBMY1FQ15415 496 aaKnown RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 CEMP1Q6PRD7 247 aaPredicted RBP16.34■□□□□ 0.21
CDR2-201ENST00000268383 FOXI1Q12951 378 aa16.33■□□□□ 0.21
CDR2-201ENST00000268383 SPATA25Q9BR10 227 aa16.33■□□□□ 0.21
CDR2-201ENST00000268383 ABCA12Q86UK0 2595 aa16.33■□□□□ 0.21
CDR2-201ENST00000268383 TRBV6-5A0A0K0K1A5 114 aa16.33■□□□□ 0.2
CDR2-201ENST00000268383 EIF4EBP3O60516 100 aaPredicted RBP16.33■□□□□ 0.2
CDR2-201ENST00000268383 KNCNA6PVL3 124 aa16.32■□□□□ 0.2
CDR2-201ENST00000268383 SYT8Q8NBV8 401 aa16.32■□□□□ 0.2
CDR2-201ENST00000268383 FHL3Q13643 280 aa16.32■□□□□ 0.2
CDR2-201ENST00000268383 PRRC2AP48634 2157 aaKnown RBP16.32■□□□□ 0.2
CDR2-201ENST00000268383 PTPN13Q12923 2485 aa16.32■□□□□ 0.2
CDR2-201ENST00000268383 WNK1Q9H4A3 2382 aa16.32■□□□□ 0.2
CDR2-201ENST00000268383 LRRK2Q5S007 2527 aa16.31■□□□□ 0.2
CDR2-201ENST00000268383 TRAV2A0A0B4J234 112 aa16.31■□□□□ 0.2
CDR2-201ENST00000268383 B4DSR2 109 aa16.31■□□□□ 0.2
CDR2-201ENST00000268383 C1QTNF4Q9BXJ3 329 aa16.31■□□□□ 0.2
CDR2-201ENST00000268383 DEFB136Q30KP8 78 aa16.31■□□□□ 0.2
CDR2-201ENST00000268383 A4D1N5 150 aa16.3■□□□□ 0.2
CDR2-201ENST00000268383 C18orf65Q6ZTR6 163 aa16.3■□□□□ 0.2
CDR2-201ENST00000268383 SCGB1C2P0DMR2 95 aa16.3■□□□□ 0.2
CDR2-201ENST00000268383 TRPT1Q86TN4 253 aaKnown RBP16.3■□□□□ 0.2
CDR2-201ENST00000268383 C20orf203Q8NBC4 194 aa16.3■□□□□ 0.2
CDR2-201ENST00000268383 TMEM223A0PJW6 202 aa16.29■□□□□ 0.2
CDR2-201ENST00000268383 ZNF22P17026 224 aaPredicted RBP16.29■□□□□ 0.2
CDR2-201ENST00000268383 IGLV4-3A0A075B6K6 122 aa16.28■□□□□ 0.2
CDR2-201ENST00000268383 C10orf126Q8N4M7 172 aa16.28■□□□□ 0.2
CDR2-201ENST00000268383 CARD19Q96LW7 228 aa16.28■□□□□ 0.2
CDR2-201ENST00000268383 SPXQ9BT56 116 aa16.28■□□□□ 0.2
CDR2-201ENST00000268383 NSUN5P1Q3KNT7 163 aa16.28■□□□□ 0.2
CDR2-201ENST00000268383 CIDEAO60543 219 aa16.27■□□□□ 0.2
CDR2-201ENST00000268383 HOXD3P31249 432 aaPredicted RBP16.27■□□□□ 0.2
CDR2-201ENST00000268383 CHD6Q8TD26 2715 aa16.27■□□□□ 0.2
CDR2-201ENST00000268383 I3L3M4 83 aa16.27■□□□□ 0.19
CDR2-201ENST00000268383 RHODO00212 210 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 MUSTN1Q8IVN3 82 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 DUX3Q96PT4 197 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 VCX2Q9H322 139 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 PRO1854Q9UHT4 67 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 ZNF469Q96JG9 3925 aaPredicted RBP16.26■□□□□ 0.19
CDR2-201ENST00000268383 AKAP9Q99996 3911 aa16.26■□□□□ 0.19
CDR2-201ENST00000268383 SONP18583 2426 aaKnown RBP16.26■□□□□ 0.19
CDR2-201ENST00000268383 TRAV8-3A0A0A6YYJ7 113 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 CDIP1Q9H305 208 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 SETD2Q9BYW2 2564 aaPredicted RBP16.25■□□□□ 0.19
CDR2-201ENST00000268383 C2CD3Q4AC94 2353 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 A8MZ25 164 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 LEPROTO15243 131 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 RHOHQ15669 191 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 FAM104AQ969W3 186 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 ODF3Q96PU9 254 aa16.25■□□□□ 0.19
CDR2-201ENST00000268383 SLURP1P55000 103 aa16.24■□□□□ 0.19
CDR2-201ENST00000268383 NF1P21359 2839 aa16.24■□□□□ 0.19
CDR2-201ENST00000268383 EPG5Q9HCE0 2579 aa16.24■□□□□ 0.19
CDR2-201ENST00000268383 TCTEX1D4Q5JR98 221 aa16.24■□□□□ 0.19
CDR2-201ENST00000268383 ELANEP08246 267 aa16.23■□□□□ 0.19
CDR2-201ENST00000268383 DEFB131AP59861 70 aa16.23■□□□□ 0.19
CDR2-201ENST00000268383 Q6ZSN1 163 aa16.23■□□□□ 0.19
CDR2-201ENST00000268383 BEX4Q9NWD9 120 aaPredicted RBP16.23■□□□□ 0.19
CDR2-201ENST00000268383 CD28P10747 220 aa16.22■□□□□ 0.19
CDR2-201ENST00000268383 SCGB1A1P11684 91 aa16.22■□□□□ 0.19
CDR2-201ENST00000268383 MT-ATP8P03928 68 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms