RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RHOHQ15669 191 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 IGHV4-59P01825 116 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
VPS33A-201ENST00000267199 C16orf54Q6UWD8 224 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 AJUBAQ96IF1 538 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 Q71RC1 249 aaPredicted RBP8.82□□□□□ -1
VPS33A-201ENST00000267199 LINC01548A6NM66 108 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 TRACP01848 142 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 HAMPP81172 84 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 HIVEP2P31629 2446 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 SIRPDQ9H106 197 aa8.82□□□□□ -1
VPS33A-201ENST00000267199 TEX49A0A1B0GTD5 131 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 IGF1P05019 195 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 DNAJC30Q96LL9 226 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 TMEM126AQ9H061 195 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 H3BUA1 57 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 DEFB112Q30KQ8 113 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 NSUN5P1Q3KNT7 163 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 Q8N1Y9 231 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
VPS33A-201ENST00000267199 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
VPS33A-201ENST00000267199 IGHV4-30-2A0A087WSY4 118 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 HERV-K104P63124 156 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 UNQ9165/PRO28630Q6UXU0 137 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 RNF185Q96GF1 192 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 ODF3BA8MYP8 253 aa8.8□□□□□ -1
VPS33A-201ENST00000267199 ABCA12Q86UK0 2595 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 TRBV12-3P01733 135 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 UFSP1Q6NVU6 142 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 TNRC6BQ9UPQ9 1833 aaKnown RBP8.79□□□□□ -1
VPS33A-201ENST00000267199 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
VPS33A-201ENST00000267199 HERVK_113P63121 156 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 CCDC140Q96MF4 163 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 TIMM17AQ99595 171 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 AGRNO00468 2067 aa8.79□□□□□ -1
VPS33A-201ENST00000267199 TET2Q6N021 2002 aaPredicted RBP8.78□□□□□ -1
VPS33A-201ENST00000267199 MDFICQ9P1T7 246 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 LINC01619G3V211 115 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 LY6LH3BQJ8 138 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 DEFB136Q30KP8 78 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 UBL5Q9BZL1 73 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 XGP55808 180 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 PIFOQ8TCI5 191 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 TMEM243Q9BU79 118 aa8.78□□□□□ -1
VPS33A-201ENST00000267199 LGALS9O00182 355 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 ELANEP08246 267 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 NEXN-AS1Q8NBZ9 246 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 TRAV13-2A0A0B4J235 113 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 A0A0J9YY99 117 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 PRB1P04280 392 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 U3KQK5 164 aa8.77□□□□□ -1.01
VPS33A-201ENST00000267199 LMO4P61968 165 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 A0A1B0GX51 115 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 U3KQE9 123 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 C5orf38Q86SI9 138 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 C10orf105Q8TEF2 133 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 NRGNQ92686 78 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 UNC80Q8N2C7 3258 aa8.76□□□□□ -1.01
VPS33A-201ENST00000267199 CRLF1O75462 422 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 SS18Q15532 418 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 A0A096LPF7 62 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 H3BT86 120 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 GHRHP01286 108 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 IGHG2P01859 326 aa8.75□□□□□ -1.01
VPS33A-201ENST00000267199 LRRK2Q5S007 2527 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-201ENST00000267199 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 VPREB3Q9UKI3 123 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 ACYP1P07311 99 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 P0DMU3 169 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 CFAP126Q5VTH2 177 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 APRG1Q8IVJ8 170 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 SRSF2Q01130 221 aaKnown RBP8.74□□□□□ -1.01
VPS33A-201ENST00000267199 Q96MF0 132 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 SPATA25Q9BR10 227 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 Q9HAA7 133 aa8.74□□□□□ -1.01
VPS33A-201ENST00000267199 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 J3QLI3 93 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 HHLA3Q9XRX5 114 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 FSTL3O95633 263 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 Q6ZQT7 251 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 ZFYVE26Q68DK2 2539 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 SLURP1P55000 103 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
VPS33A-201ENST00000267199 A0A096LNJ9 63 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 A0A0B4J2C4 111 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 XCL1P47992 114 aa8.72□□□□□ -1.01
VPS33A-201ENST00000267199 EBI3Q14213 229 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms