RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 WFDC11Q8NEX6 87 aa10.64□□□□□ -0.71
CDH3-201ENST00000264012 MLST8Q9BVC4 326 aa10.64□□□□□ -0.71
CDH3-201ENST00000264012 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
CDH3-201ENST00000264012 A0A1B0GXF2 115 aa10.64□□□□□ -0.71
CDH3-201ENST00000264012 SOCS3O14543 225 aa10.64□□□□□ -0.71
CDH3-201ENST00000264012 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 Q6YL49 198 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 CFC1P0CG37 223 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 HIGD1BQ9P298 99 aa10.63□□□□□ -0.71
CDH3-201ENST00000264012 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 CRLF1O75462 422 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 HERV-K104P63124 156 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 LRP4O75096 1905 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
CDH3-201ENST00000264012 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 BAALCQ8WXS3 180 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 TIMM17AQ99595 171 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 TLN2Q9Y4G6 2542 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 KIAA1549Q9HCM3 1950 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 IGLV10-54A0A075B6I4 117 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 Q9HAA7 133 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 EDA2RQ9HAV5 297 aa10.61□□□□□ -0.71
CDH3-201ENST00000264012 IGLL5B9A064 214 aa10.6□□□□□ -0.71
CDH3-201ENST00000264012 C1orf43Q9BWL3 253 aa10.6□□□□□ -0.71
CDH3-201ENST00000264012 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
CDH3-201ENST00000264012 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
CDH3-201ENST00000264012 SPATA12Q7Z6I5 190 aa10.6□□□□□ -0.71
CDH3-201ENST00000264012 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 ZNF843Q8N446 348 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 GDF5OSQ5U4N7 250 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
CDH3-201ENST00000264012 K7EQG2 157 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 ODF1Q14990 250 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
CDH3-201ENST00000264012 DEFB4AO15263 64 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 CDSNQ15517 529 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 MBD6Q96DN6 1003 aa10.59□□□□□ -0.71
CDH3-201ENST00000264012 LGALS9O00182 355 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 IFITM1P13164 125 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 INSL3P51460 131 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 ARHGAP32A7KAX9 2087 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
CDH3-201ENST00000264012 COX7A2LO14548 114 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 A4D1N5 150 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 TANC2Q9HCD6 1990 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 Q8N6K4 173 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
CDH3-201ENST00000264012 HCFC1P51610 2035 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 E9PLD3 99 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 JMJD1CQ15652 2540 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 FXYD2P54710 66 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
CDH3-201ENST00000264012 NTN5Q8WTR8 489 aaPredicted RBP10.55□□□□□ -0.72
CDH3-201ENST00000264012 PRRC2AP48634 2157 aaKnown RBP10.55□□□□□ -0.72
CDH3-201ENST00000264012 DEFB114Q30KQ6 69 aa10.55□□□□□ -0.72
CDH3-201ENST00000264012 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
CDH3-201ENST00000264012 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
CDH3-201ENST00000264012 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
CDH3-201ENST00000264012 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
CDH3-201ENST00000264012 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 SPTBN4Q9H254 2564 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 OPRPNQ99935 248 aaPredicted RBP10.54□□□□□ -0.72
CDH3-201ENST00000264012 UBL5Q9BZL1 73 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 Q6ZSV7 163 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 DSCAML1Q8TD84 2053 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 G3V4G9 280 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 CCL18P55774 89 aa10.54□□□□□ -0.72
CDH3-201ENST00000264012 ABCA12Q86UK0 2595 aa10.53□□□□□ -0.72
CDH3-201ENST00000264012 CRIP1P50238 77 aa10.53□□□□□ -0.72
CDH3-201ENST00000264012 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
CDH3-201ENST00000264012 DAND5Q8N907 189 aa10.53□□□□□ -0.72
CDH3-201ENST00000264012 RPL32P62910 135 aaKnown RBP10.52□□□□□ -0.72
CDH3-201ENST00000264012 Q6ZTI0 123 aa10.52□□□□□ -0.72
CDH3-201ENST00000264012 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
CDH3-201ENST00000264012 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms