RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ANKRD29Q8N6D5 301 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 IGHV4-30-2A0A087WSY4 118 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 C10orf126Q8N4M7 172 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 NRGNQ92686 78 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 VCX2Q9H322 139 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 CRIP2P52943 208 aaPredicted RBP9.22□□□□□ -0.93
CHMP3-201ENST00000263856 UCNP55089 124 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 PROK1P58294 105 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 C19orf54Q5BKX5 351 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 KLLNB2CW77 178 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 ACACBO00763 2458 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 XGP55808 180 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 TMEM141Q96I45 108 aa9.22□□□□□ -0.93
CHMP3-201ENST00000263856 MED14OSP0DP75 135 aa9.21□□□□□ -0.93
CHMP3-201ENST00000263856 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.93
CHMP3-201ENST00000263856 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.93
CHMP3-201ENST00000263856 SETD2Q9BYW2 2564 aaPredicted RBP9.21□□□□□ -0.94
CHMP3-201ENST00000263856 PTPN13Q12923 2485 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 LINC01619G3V211 115 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 CD28P10747 220 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 FAM19A4Q96LR4 140 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV4-59P01825 116 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 DCANP1Q8TF63 244 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 MYO18BQ8IUG5 2567 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 A8MZ25 164 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 AVPP01185 164 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 TEN1Q86WV5 123 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 SCGB1A1P11684 91 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 UBE2D3P61077 147 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 UBE2D2P62837 147 aa9.2□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV4OR15-8A0A075B7B6 117 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV1OR15-1A0A075B7D0 117 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 A0A087WW49 117 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 A6NDX4 124 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 SLC25A20O43772 301 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 KLK9Q2XQG4 91 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 FLNCQ14315 2725 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 A0A0U1RRA0 63 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 M0QY20 66 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 Q6ZUT4 128 aa9.19□□□□□ -0.94
CHMP3-201ENST00000263856 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
CHMP3-201ENST00000263856 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-201ENST00000263856 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
CHMP3-201ENST00000263856 DEFB136Q30KP8 78 aa9.18□□□□□ -0.94
CHMP3-201ENST00000263856 Q6ZSV7 163 aa9.18□□□□□ -0.94
CHMP3-201ENST00000263856 RHODO00212 210 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 MSMBP08118 114 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 Q9UF83 564 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 SONP18583 2426 aaKnown RBP9.17□□□□□ -0.94
CHMP3-201ENST00000263856 A0A0J9YX75 114 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 I3L3M4 83 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 LGALS9O00182 355 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 CRYBA4P53673 196 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 DAND5Q8N907 189 aa9.17□□□□□ -0.94
CHMP3-201ENST00000263856 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-201ENST00000263856 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 NXPH4O95158 308 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 ELANEP08246 267 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 ANKRD17O75179 2603 aaKnown RBP9.16□□□□□ -0.94
CHMP3-201ENST00000263856 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-201ENST00000263856 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-201ENST00000263856 LEPROTO15243 131 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 DEFB112Q30KQ8 113 aa9.16□□□□□ -0.94
CHMP3-201ENST00000263856 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.94
CHMP3-201ENST00000263856 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.94
CHMP3-201ENST00000263856 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.94
CHMP3-201ENST00000263856 PKD1L2Q7Z442 2459 aa9.15□□□□□ -0.94
CHMP3-201ENST00000263856 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.95
CHMP3-201ENST00000263856 IGLV1-40P01703 118 aa9.15□□□□□ -0.95
CHMP3-201ENST00000263856 IGHV3-33P01772 117 aa9.15□□□□□ -0.95
CHMP3-201ENST00000263856 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.95
CHMP3-201ENST00000263856 AMELXQ99217 191 aa9.15□□□□□ -0.95
CHMP3-201ENST00000263856 H3BUA1 57 aa9.14□□□□□ -0.95
CHMP3-201ENST00000263856 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
CHMP3-201ENST00000263856 DEFB131AP59861 70 aa9.14□□□□□ -0.95
CHMP3-201ENST00000263856 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-201ENST00000263856 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
CHMP3-201ENST00000263856 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms