RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 LINC01549A6NIU2 74 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 EIF4EBP1Q13541 118 aaPredicted RBP7.35□□□□□ -1.23
SIM1-201ENST00000262901 C1orf159Q96HA4 380 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 IGHV3-16A0A0C4DH30 117 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 FAM223BA6NKX1 122 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
SIM1-201ENST00000262901 ZNF415Q09FC8 603 aa7.34□□□□□ -1.23
SIM1-201ENST00000262901 ZFHX4Q86UP3 3567 aa7.34□□□□□ -1.23
SIM1-201ENST00000262901 IGHV4-31P0DP07 118 aa7.34□□□□□ -1.23
SIM1-201ENST00000262901 HELZ2Q9BYK8 2649 aaKnown RBP7.34□□□□□ -1.24
SIM1-201ENST00000262901 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.24
SIM1-201ENST00000262901 ODF3BA8MYP8 253 aa7.34□□□□□ -1.24
SIM1-201ENST00000262901 DLX4Q92988 240 aaPredicted RBP7.34□□□□□ -1.24
SIM1-201ENST00000262901 IGLV11-55A0A075B6I3 123 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 IGHV4-38-2P0DP08 117 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 F8VRH5 84 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 KLF12Q9Y4X4 402 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 ANKRD17O75179 2603 aaKnown RBP7.33□□□□□ -1.24
SIM1-201ENST00000262901 TRGV4A0A0C4DH28 118 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 ZNF561-AS1K7EIQ3 104 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 BLCAPP62952 87 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 HERVK_113P63121 156 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 RNASE13Q5GAN3 156 aaKnown RBP7.33□□□□□ -1.24
SIM1-201ENST00000262901 CHCHD5Q9BSY4 110 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 XCL2Q9UBD3 114 aa7.33□□□□□ -1.24
SIM1-201ENST00000262901 IGHV3-38A0A0C4DH36 116 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 Q5XG85 94 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 KLHL30-AS1Q8NEE0 82 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
SIM1-201ENST00000262901 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 TMEM86BQ8N661 226 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 RPL39LQ96EH5 51 aaKnown RBP7.32□□□□□ -1.24
SIM1-201ENST00000262901 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 TRPT1Q86TN4 253 aaKnown RBP7.32□□□□□ -1.24
SIM1-201ENST00000262901 PRO0628Q9UI54 55 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 FLNCQ14315 2725 aa7.32□□□□□ -1.24
SIM1-201ENST00000262901 M0R2P5 195 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 OXTP01178 125 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
SIM1-201ENST00000262901 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 TMEM89A2RUT3 159 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 BUB3O43684 328 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 Q8N9W7 124 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 TRBV25-1A0A075B6N4 114 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 MALP21145 153 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 LINC00336Q6ZUF6 198 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
SIM1-201ENST00000262901 C19orf71A6NCJ1 209 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 NDUFA4O00483 81 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 HLA-DRB4P13762 266 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 NSUN5P1Q3KNT7 163 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 HLA-DRB4X5D2U9 266 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 LY6LH3BQJ8 138 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 FGF6P10767 208 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 RETNQ9HD89 108 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 PMVKQ15126 192 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 C10orf126Q8N4M7 172 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 COPS9Q8WXC6 57 aa7.3□□□□□ -1.24
SIM1-201ENST00000262901 DEFB112Q30KQ8 113 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 PLEKHB2Q96CS7 222 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 HECTD1Q9ULT8 2610 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 ZNF80P51504 273 aaPredicted RBP7.29□□□□□ -1.24
SIM1-201ENST00000262901 CFHR3Q02985 330 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 A0A1B0GX51 115 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 FXYD2P54710 66 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 LINC00158P58513 81 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
SIM1-201ENST00000262901 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 NDUFA7O95182 113 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 CRYGDP07320 174 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 RPL36AP83881 106 aaKnown RBP7.28□□□□□ -1.24
SIM1-201ENST00000262901 CEND1Q8N111 149 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 RPL36ALQ969Q0 106 aaKnown RBP7.28□□□□□ -1.24
SIM1-201ENST00000262901 IGHV1OR15-1A0A075B7D0 117 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 INS-IGF2F8WCM5 200 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 DEFB136Q30KP8 78 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 IGHV4-59P01825 116 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 C12orf74Q32Q52 190 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 PRIMA1Q86XR5 153 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 NPBQ8NG41 125 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 MLST8Q9BVC4 326 aa7.28□□□□□ -1.24
SIM1-201ENST00000262901 ADGRG4Q8IZF6 3080 aa7.27□□□□□ -1.24
SIM1-201ENST00000262901 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.24
SIM1-201ENST00000262901 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
SIM1-201ENST00000262901 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
SIM1-201ENST00000262901 TRAV8-4A0A0B4J246 113 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms