RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 H3BMM0 161 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 JPT2Q9H910 190 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 PKD1L2Q7Z442 2459 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 ABCA4P78363 2273 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 TMEM223A0PJW6 202 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
XRCC1-201ENST00000262887 CHCHD5Q9BSY4 110 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
XRCC1-201ENST00000262887 A0A087WWL8 130 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 NXPH4O95158 308 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
XRCC1-201ENST00000262887 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
XRCC1-201ENST00000262887 MUC4Q99102 2169 aa11.22□□□□□ -0.61
XRCC1-201ENST00000262887 CACNA1BQ00975 2339 aa11.21□□□□□ -0.61
XRCC1-201ENST00000262887 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
XRCC1-201ENST00000262887 PF4V1P10720 104 aa11.21□□□□□ -0.61
XRCC1-201ENST00000262887 AKAP6Q13023 2319 aa11.21□□□□□ -0.61
XRCC1-201ENST00000262887 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.62
XRCC1-201ENST00000262887 ZFP36P26651 326 aaKnown RBP11.21□□□□□ -0.62
XRCC1-201ENST00000262887 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 LGALS9O00182 355 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 UNQ9165/PRO28630Q6UXU0 137 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 SPTBN1Q01082 2364 aaKnown RBP11.2□□□□□ -0.62
XRCC1-201ENST00000262887 IGKV3-7A0A075B6H7 116 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 SOCS3O14543 225 aa11.2□□□□□ -0.62
XRCC1-201ENST00000262887 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
XRCC1-201ENST00000262887 SMIM9A6NGZ8 99 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 TRIAP1O43715 76 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 SIRPDQ9H106 197 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 FLNCQ14315 2725 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 EPG5Q9HCE0 2579 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 LY6DQ14210 128 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
XRCC1-201ENST00000262887 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
XRCC1-201ENST00000262887 M0R2P5 195 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 SAA4P35542 130 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 IGHV1-69P01742 117 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
XRCC1-201ENST00000262887 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
XRCC1-201ENST00000262887 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
XRCC1-201ENST00000262887 NBL1P41271 181 aa11.17□□□□□ -0.62
XRCC1-201ENST00000262887 A0A0J9YX75 114 aa11.17□□□□□ -0.62
XRCC1-201ENST00000262887 UBE2E1P51965 193 aa11.17□□□□□ -0.62
XRCC1-201ENST00000262887 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
XRCC1-201ENST00000262887 WIPF1O43516 503 aa11.17□□□□□ -0.62
XRCC1-201ENST00000262887 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 TRBV6-5A0A0K0K1A5 114 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 H7C423 109 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
XRCC1-201ENST00000262887 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
XRCC1-201ENST00000262887 ICOSQ9Y6W8 199 aa11.15□□□□□ -0.62
XRCC1-201ENST00000262887 H3BT86 120 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 NDUFA4O00483 81 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 ZNF56Q15929 161 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 RHOHQ15669 191 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
XRCC1-201ENST00000262887 TRBV7-7A0A0K0K1E9 115 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 CACNA1AO00555 2505 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 KLLNB2CW77 178 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 PRSS2P07478 247 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 COX6CP09669 75 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 LRRC75A-AS1Q8N1F1 130 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 FAM240AA0A1B0GVK7 77 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 NPFFO15130 113 aa11.13□□□□□ -0.63
XRCC1-201ENST00000262887 FAM19A5Q7Z5A7 132 aaPredicted RBP11.13□□□□□ -0.63
XRCC1-201ENST00000262887 HRNRQ86YZ3 2850 aaPredicted RBP11.12□□□□□ -0.63
XRCC1-201ENST00000262887 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 NDUFA7O95182 113 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 C9orf153Q5TBE3 101 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 DUX3Q96PT4 197 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 LITAFQ99732 161 aa11.12□□□□□ -0.63
XRCC1-201ENST00000262887 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 J3KT08 172 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 IGHV3-30-3P0DP02 117 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 M0QY20 66 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 UBTD1Q9HAC8 227 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
XRCC1-201ENST00000262887 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 FBXL19-AS1Q494R0 122 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 CLEC2BQ92478 149 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
XRCC1-201ENST00000262887 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms