RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 GAGE4Q13068 117 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 GAGE5Q13069 117 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
TIMP2-201ENST00000262768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
TIMP2-201ENST00000262768 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
TIMP2-201ENST00000262768 H7C1H1 209 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 PSMG3-AS1Q96PY0 264 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 VPS25Q9BRG1 176 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 MAP6D1Q9H9H5 199 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 SOCS3O14543 225 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
TIMP2-201ENST00000262768 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
TIMP2-201ENST00000262768 MRPS16Q9Y3D3 137 aaKnown RBP11.23□□□□□ -0.61
TIMP2-201ENST00000262768 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
TIMP2-201ENST00000262768 C19orf54Q5BKX5 351 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 GEMIN7Q9H840 131 aaKnown RBP11.22□□□□□ -0.61
TIMP2-201ENST00000262768 TRGV4A0A0C4DH28 118 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 ODF1Q14990 250 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
TIMP2-201ENST00000262768 H3BMM0 161 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 DEFB114Q30KQ6 69 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 AZU1P20160 251 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 NRACQ8N912 160 aa11.21□□□□□ -0.61
TIMP2-201ENST00000262768 CHAC1Q9BUX1 264 aa11.21□□□□□ -0.62
TIMP2-201ENST00000262768 TSSC4Q9Y5U2 329 aaPredicted RBP11.21□□□□□ -0.62
TIMP2-201ENST00000262768 TENM4Q6N022 2769 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 CRIP2P52943 208 aaPredicted RBP11.2□□□□□ -0.62
TIMP2-201ENST00000262768 C4orf3Q8WVX3 66 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 NOTCH1P46531 2555 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 COTL1Q14019 142 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
TIMP2-201ENST00000262768 ZFP2Q6ZN57 461 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 F8VRH5 84 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 LRRC75A-AS1Q8N1F1 130 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 SPAG8Q99932 426 aaPredicted RBP11.19□□□□□ -0.62
TIMP2-201ENST00000262768 COX11Q9Y6N1 276 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 UBE2L6O14933 153 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
TIMP2-201ENST00000262768 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
TIMP2-201ENST00000262768 PSMB2P49721 201 aa11.18□□□□□ -0.62
TIMP2-201ENST00000262768 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
TIMP2-201ENST00000262768 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
TIMP2-201ENST00000262768 KLLNB2CW77 178 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 U3KQK5 164 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 A0A087WX48 190 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 A0A096LNT2 108 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 PLNP26678 52 aa11.17□□□□□ -0.62
TIMP2-201ENST00000262768 LY6G6DO95868 133 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 C20orf78Q9BR46 151 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 Q9UF83 564 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 FABP2P12104 132 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 HSD52Q0P140 79 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
TIMP2-201ENST00000262768 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
TIMP2-201ENST00000262768 BAALCQ8WXS3 180 aa11.15□□□□□ -0.62
TIMP2-201ENST00000262768 I3L3M4 83 aa11.15□□□□□ -0.62
TIMP2-201ENST00000262768 M0R2P5 195 aa11.15□□□□□ -0.62
TIMP2-201ENST00000262768 Q6ZTI0 123 aa11.15□□□□□ -0.62
TIMP2-201ENST00000262768 LINC00482Q8N8I6 264 aa11.15□□□□□ -0.62
TIMP2-201ENST00000262768 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 FXYD2P54710 66 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
TIMP2-201ENST00000262768 PMVKQ15126 192 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 GTF2H5Q6ZYL4 71 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 MAPKAPK5-AS1Q8N8E1 139 aa11.14□□□□□ -0.63
TIMP2-201ENST00000262768 C11orf86A6NJI1 115 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 LGALS9O00182 355 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
TIMP2-201ENST00000262768 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 LURAP1LQ8IV03 231 aa11.13□□□□□ -0.63
TIMP2-201ENST00000262768 CCL25O15444 150 aa11.12□□□□□ -0.63
TIMP2-201ENST00000262768 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
TIMP2-201ENST00000262768 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
TIMP2-201ENST00000262768 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
TIMP2-201ENST00000262768 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
TIMP2-201ENST00000262768 A8MWV9 139 aa11.11□□□□□ -0.63
TIMP2-201ENST00000262768 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
TIMP2-201ENST00000262768 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms