RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
PTPN3-201ENST00000262539 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 C9JAW5 83 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 CRYBA4P53673 196 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 A0A0J9YX75 114 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 LGALS9BQ3B8N2 356 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 LGALS9CQ6DKI2 356 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 ZFAND6Q6FIF0 208 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 ABCA12Q86UK0 2595 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 NDUFB1O75438 58 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 TLN2Q9Y4G6 2542 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 NPSP0C0P6 89 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 PTH2Q96A98 100 aa6.26□□□□□ -1.41
PTPN3-201ENST00000262539 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 IGLV2-11P01706 119 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 DOCK11Q5JSL3 2073 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 K7EQD1 137 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 C2orf70A6NJV1 201 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 TRAV13-2A0A0B4J235 113 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 INAFM1C9JVW0 142 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 F6UB75 175 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 SPRY2O43597 315 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 C5orf38Q86SI9 138 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 B9D2Q9BPU9 175 aa6.25□□□□□ -1.41
PTPN3-201ENST00000262539 IGHV4OR15-8A0A075B7B6 117 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 A0A087WW49 117 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 C3orf79P0CE67 100 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 C16orf95Q9H693 158 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 PRB2P02812 416 aaPredicted RBP6.24□□□□□ -1.41
PTPN3-201ENST00000262539 C2orf66Q6UXQ4 117 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 NCR3O14931 201 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 UBE2D1P51668 147 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 AMTNQ6UX39 209 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 COX7A2LO14548 114 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 STPG4Q8N801 248 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
PTPN3-201ENST00000262539 KIR2DL5BA0A0G2JN68 375 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 KIR2DL5BA0A0G2JPC4 375 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 PLA2G2AP14555 144 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 KIR2DL5AQ8N109 375 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 KLLNB2CW77 178 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 C5orf47Q569G3 176 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 BAALCQ8WXS3 180 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 ZNF702PQ9H963 129 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 ZNF124Q15973 351 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 GNRH2O43555 120 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 LY6G6CO95867 125 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 TRACP01848 142 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 SEC61GP60059 68 aa6.23□□□□□ -1.41
PTPN3-201ENST00000262539 YLPM1P49750 1951 aaKnown RBP6.23□□□□□ -1.41
PTPN3-201ENST00000262539 A0A096LNT2 108 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 HHLA3Q9XRX5 114 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPN3-201ENST00000262539 DNAJC9-AS1A6NH13 148 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 C14orf177Q52M58 125 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 LINC00467Q9BRT7 94 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 SIVA1O15304 175 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 ZFAND2AQ8N6M9 145 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 MPV17L2Q567V2 206 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 TP53TG3Q9ULZ0 132 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 U3KQK5 164 aa6.22□□□□□ -1.41
PTPN3-201ENST00000262539 BBC3Q96PG8 261 aaPredicted RBP6.21□□□□□ -1.41
PTPN3-201ENST00000262539 TRBV6-5A0A0K0K1A5 114 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
PTPN3-201ENST00000262539 ADAMTSL5Q6ZMM2 481 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 SLC25A29Q8N8R3 303 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 ZNF747Q9BV97 191 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 RANBP2P49792 3224 aaKnown RBP6.21□□□□□ -1.42
PTPN3-201ENST00000262539 M0R2N4 97 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 Q6ZSV7 163 aa6.21□□□□□ -1.42
PTPN3-201ENST00000262539 NDUFA11Q86Y39 141 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 H0Y9J4 135 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 NDUFA1O15239 70 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 MTORP42345 2549 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 DLEU1O43261 78 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 WFDC11Q8NEX6 87 aa6.2□□□□□ -1.42
PTPN3-201ENST00000262539 SMIM9A6NGZ8 99 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 SONP18583 2426 aaKnown RBP6.19□□□□□ -1.42
PTPN3-201ENST00000262539 AVPP01185 164 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 HLA-DMBP28068 263 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 ZFP2Q6ZN57 461 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 UNQ9165/PRO28630Q6UXU0 137 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 USP24Q9UPU5 2620 aa6.19□□□□□ -1.42
PTPN3-201ENST00000262539 C7orf33Q8WU49 177 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms