RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 ZFHX3Q15911 3703 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 XGP55808 180 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 CFHR3Q02985 330 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 CLEC2BQ92478 149 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 NRGNQ92686 78 aa10.6□□□□□ -0.71
TUBGCP3-201ENST00000261965 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 TEX49A0A1B0GTD5 131 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 DEFB131AP59861 70 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
TUBGCP3-201ENST00000261965 CFC1BP0CG36 223 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 CFC1P0CG37 223 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 Q6ZUT4 128 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 TEN1Q86WV5 123 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 C19orf84I3L1E1 186 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 CIRBPQ14011 172 aaKnown RBP10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 NRACQ8N912 160 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 C19orf54Q5BKX5 351 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 Q6ZSV7 163 aa10.58□□□□□ -0.72
TUBGCP3-201ENST00000261965 FLNCQ14315 2725 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 OOSP1A8MZH6 123 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 CRIP2P52943 208 aaPredicted RBP10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 AJUBAQ96IF1 538 aa10.57□□□□□ -0.72
TUBGCP3-201ENST00000261965 NBL1P41271 181 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 ATXN8Q156A1 80 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 TAL2Q16559 108 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 ZNF48Q96MX3 618 aaPredicted RBP10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 CCL19Q99731 98 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 GNLYP22749 145 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 GATA3P23771 443 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 PROK1P58294 105 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 LMO4P61968 165 aa10.56□□□□□ -0.72
TUBGCP3-201ENST00000261965 Q8N1Y9 231 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 CARD19Q96LW7 228 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 TOMM6Q96B49 74 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 ZNF462Q96JM2 2506 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 IGHV4-61A0A0C4DH41 118 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 H3BMM0 161 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
TUBGCP3-201ENST00000261965 DNAL4O96015 105 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 PIMREGQ9BSJ6 248 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 EBI3Q14213 229 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 UTP20O75691 2785 aaKnown RBP10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 SCGB1A1P11684 91 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 FBXL19-AS1Q494R0 122 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
TUBGCP3-201ENST00000261965 UBE2L6O14933 153 aa10.53□□□□□ -0.72
TUBGCP3-201ENST00000261965 MORN3Q6PF18 240 aaPredicted RBP10.53□□□□□ -0.72
TUBGCP3-201ENST00000261965 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
TUBGCP3-201ENST00000261965 GAGE2AQ6NT46 116 aa10.53□□□□□ -0.72
TUBGCP3-201ENST00000261965 A0A0J9YY99 117 aa10.52□□□□□ -0.72
TUBGCP3-201ENST00000261965 IGLV2-18A0A075B6J9 118 aa10.52□□□□□ -0.73
TUBGCP3-201ENST00000261965 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.73
TUBGCP3-201ENST00000261965 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
TUBGCP3-201ENST00000261965 VPS13CQ709C8 3753 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 ANKRD17O75179 2603 aaKnown RBP10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 IFITM1P13164 125 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 PFN2P35080 140 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 CNFNQ9BYD5 112 aa10.51□□□□□ -0.73
TUBGCP3-201ENST00000261965 MUC4Q99102 2169 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 CHD6Q8TD26 2715 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV1OR15-1A0A075B7D0 117 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV4-59P01825 116 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 ITPR1Q14643 2758 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 CELSR2Q9HCU4 2923 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 LINC00158P58513 81 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE12JA6NER3 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE7O76087 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE12FP0CL80 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE12GP0CL81 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE12IP0CL82 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE4Q13068 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 GAGE5Q13069 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms