RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TET2Q6N021 2002 aaPredicted RBP12.39□□□□□ -0.43
SREBF1-201ENST00000261646 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
SREBF1-201ENST00000261646 CRYGBP07316 175 aa12.39□□□□□ -0.43
SREBF1-201ENST00000261646 C6orf226Q5I0X4 101 aa12.39□□□□□ -0.43
SREBF1-201ENST00000261646 IGF1P05019 195 aa12.38□□□□□ -0.43
SREBF1-201ENST00000261646 PFN2P35080 140 aa12.38□□□□□ -0.43
SREBF1-201ENST00000261646 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
SREBF1-201ENST00000261646 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
SREBF1-201ENST00000261646 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
SREBF1-201ENST00000261646 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
SREBF1-201ENST00000261646 HOXB4P17483 251 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-201ENST00000261646 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 REV3LO60673 3130 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 CENPVL3A0A0U1RRI6 287 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 SLC25A29Q8N8R3 303 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 SOCS3O14543 225 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
SREBF1-201ENST00000261646 RHODO00212 210 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 TRACP01848 142 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 GNLYP22749 145 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 MAPK1IP1LQ8NDC0 245 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 OVOL2Q9BRP0 275 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 FRYQ5TBA9 3013 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 POLQO75417 2590 aa12.36□□□□□ -0.43
SREBF1-201ENST00000261646 TINCRA0A1B0GVN0 87 aa12.35□□□□□ -0.43
SREBF1-201ENST00000261646 IGHV1-69P01742 117 aa12.35□□□□□ -0.43
SREBF1-201ENST00000261646 H3BT86 120 aa12.35□□□□□ -0.43
SREBF1-201ENST00000261646 HOXD3P31249 432 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-201ENST00000261646 NRACQ8N912 160 aa12.34□□□□□ -0.43
SREBF1-201ENST00000261646 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
SREBF1-201ENST00000261646 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
SREBF1-201ENST00000261646 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
SREBF1-201ENST00000261646 ACYP1P07311 99 aa12.33□□□□□ -0.43
SREBF1-201ENST00000261646 S100A7L2Q5SY68 101 aa12.33□□□□□ -0.43
SREBF1-201ENST00000261646 UNQ9165/PRO28630Q6UXU0 137 aa12.33□□□□□ -0.43
SREBF1-201ENST00000261646 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
SREBF1-201ENST00000261646 LGALS9O00182 355 aa12.33□□□□□ -0.44
SREBF1-201ENST00000261646 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
SREBF1-201ENST00000261646 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 FSTL3O95633 263 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 INSP01308 110 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 Q8NA96 180 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 MALP21145 153 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
SREBF1-201ENST00000261646 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 CEMP1Q6PRD7 247 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-201ENST00000261646 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 LINC01548A6NM66 108 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 HERVK_113P63121 156 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 AJUBAQ96IF1 538 aa12.31□□□□□ -0.44
SREBF1-201ENST00000261646 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 COL6A3P12111 3177 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 IGKV3D-7A0A0C4DH55 119 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 Q6ZS46 218 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 TRBV12-3P01733 135 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 BLCAPP62952 87 aa12.3□□□□□ -0.44
SREBF1-201ENST00000261646 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
SREBF1-201ENST00000261646 A0A0B4J2C4 111 aa12.29□□□□□ -0.44
SREBF1-201ENST00000261646 TRAV13-2A0A0B4J235 113 aa12.29□□□□□ -0.44
SREBF1-201ENST00000261646 MED14OSP0DP75 135 aa12.29□□□□□ -0.44
SREBF1-201ENST00000261646 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
SREBF1-201ENST00000261646 COL5A1P20908 1838 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-201ENST00000261646 CFHR3Q02985 330 aa12.28□□□□□ -0.44
SREBF1-201ENST00000261646 Q6ZQT7 251 aa12.28□□□□□ -0.44
SREBF1-201ENST00000261646 CCDC179H3BU77 68 aa12.28□□□□□ -0.44
SREBF1-201ENST00000261646 NXPH4O95158 308 aa12.28□□□□□ -0.44
SREBF1-201ENST00000261646 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
SREBF1-201ENST00000261646 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.44
SREBF1-201ENST00000261646 A0A1B0GX51 115 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 TRIAP1O43715 76 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 B4DSR2 109 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 ZMAT4Q9H898 229 aa12.27□□□□□ -0.45
SREBF1-201ENST00000261646 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
SREBF1-201ENST00000261646 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
SREBF1-201ENST00000261646 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-201ENST00000261646 HAMPP81172 84 aa12.26□□□□□ -0.45
SREBF1-201ENST00000261646 ZFAND3Q9H8U3 227 aa12.26□□□□□ -0.45
SREBF1-201ENST00000261646 HIVEP2P31629 2446 aa12.25□□□□□ -0.45
SREBF1-201ENST00000261646 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-201ENST00000261646 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
SREBF1-201ENST00000261646 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
SREBF1-201ENST00000261646 UBL5Q9BZL1 73 aa12.25□□□□□ -0.45
SREBF1-201ENST00000261646 HTN3P15516 51 aa12.25□□□□□ -0.45
SREBF1-201ENST00000261646 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
SREBF1-201ENST00000261646 C20orf173Q96LM9 149 aa12.24□□□□□ -0.45
SREBF1-201ENST00000261646 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
SREBF1-201ENST00000261646 RPL35AP18077 110 aaKnown RBP12.24□□□□□ -0.45
SREBF1-201ENST00000261646 COX6B1P14854 86 aa12.23□□□□□ -0.45
SREBF1-201ENST00000261646 LINC01619G3V211 115 aa12.23□□□□□ -0.45
SREBF1-201ENST00000261646 LY6LH3BQJ8 138 aa12.23□□□□□ -0.45
SREBF1-201ENST00000261646 PRR9Q5T870 116 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms