RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ACYP1P07311 99 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 DIRC1Q969H9 104 aa9.2□□□□□ -0.94
COL8A1-201ENST00000261037 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
COL8A1-201ENST00000261037 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
COL8A1-201ENST00000261037 COL4A4P53420 1690 aaPredicted RBP9.19□□□□□ -0.94
COL8A1-201ENST00000261037 COL4A3Q01955 1670 aa9.19□□□□□ -0.94
COL8A1-201ENST00000261037 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
COL8A1-201ENST00000261037 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
COL8A1-201ENST00000261037 E9PLD3 99 aa9.19□□□□□ -0.94
COL8A1-201ENST00000261037 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 LOXL1Q08397 574 aaPredicted RBP9.18□□□□□ -0.94
COL8A1-201ENST00000261037 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 H0Y9J4 135 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 Q6ZTI0 123 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 IGKV1D-37A0A075B6S9 117 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 IGHV1-58A0A0C4DH39 117 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 FAM110AQ9BQ89 295 aa9.18□□□□□ -0.94
COL8A1-201ENST00000261037 MP68P56378 58 aa9.17□□□□□ -0.94
COL8A1-201ENST00000261037 C11orf45Q8TAV5 145 aa9.17□□□□□ -0.94
COL8A1-201ENST00000261037 ODF1Q14990 250 aa9.17□□□□□ -0.94
COL8A1-201ENST00000261037 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
COL8A1-201ENST00000261037 DYSFO75923 2080 aa9.17□□□□□ -0.94
COL8A1-201ENST00000261037 ZFHX2Q9C0A1 2572 aaPredicted RBP9.17□□□□□ -0.94
COL8A1-201ENST00000261037 ZNF106Q9H2Y7 1883 aaKnown RBP9.17□□□□□ -0.94
COL8A1-201ENST00000261037 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 RNF183Q96D59 192 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 PRO0255Q9UI72 69 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 EP400Q96L91 3159 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 PCNX1Q96RV3 2341 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 CXCL5P42830 114 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 LRCOL1A6NCL2 159 aa9.16□□□□□ -0.94
COL8A1-201ENST00000261037 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
COL8A1-201ENST00000261037 TAX1BP3O14907 124 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
COL8A1-201ENST00000261037 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 LINC00322Q6ZN03 302 aaPredicted RBP9.15□□□□□ -0.94
COL8A1-201ENST00000261037 ZGRF1Q86YA3 2104 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 C19orf71A6NCJ1 209 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 ODF3BA8MYP8 253 aa9.15□□□□□ -0.94
COL8A1-201ENST00000261037 ABCA4P78363 2273 aa9.15□□□□□ -0.95
COL8A1-201ENST00000261037 TTC28Q96AY4 2481 aa9.15□□□□□ -0.95
COL8A1-201ENST00000261037 IGF1P05019 195 aa9.15□□□□□ -0.95
COL8A1-201ENST00000261037 PTH2Q96A98 100 aa9.15□□□□□ -0.95
COL8A1-201ENST00000261037 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.95
COL8A1-201ENST00000261037 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 COX7BP24311 80 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 KIAA1549LQ6ZVL6 1849 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 A0A096LNI7 61 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 TRBV10-2A0A0K0K1G8 114 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 TEN1Q86WV5 123 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 PRORYQ9H606 182 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 GTF3C1Q12789 2109 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 REG3AQ06141 175 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 WNK2Q9Y3S1 2297 aa9.14□□□□□ -0.95
COL8A1-201ENST00000261037 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 DENND4AQ7Z401 1863 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 LMO4P61968 165 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 CRYGBP07316 175 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 TNFRSF13BO14836 293 aaPredicted RBP9.13□□□□□ -0.95
COL8A1-201ENST00000261037 FOXI1Q12951 378 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 DOPEY2Q9Y3R5 2298 aa9.13□□□□□ -0.95
COL8A1-201ENST00000261037 SPTAN1Q13813 2472 aaKnown RBP9.12□□□□□ -0.95
COL8A1-201ENST00000261037 Q6YL49 198 aa9.12□□□□□ -0.95
COL8A1-201ENST00000261037 C10orf99Q6UWK7 81 aa9.12□□□□□ -0.95
COL8A1-201ENST00000261037 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
COL8A1-201ENST00000261037 C11orf1Q9H5F2 150 aa9.12□□□□□ -0.95
COL8A1-201ENST00000261037 TMEM131Q92545 1883 aa9.12□□□□□ -0.95
COL8A1-201ENST00000261037 ATOX1O00244 68 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 TNRC6AQ8NDV7 1962 aaKnown RBP9.11□□□□□ -0.95
COL8A1-201ENST00000261037 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 CRYGDP07320 174 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 INSL3P51460 131 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 MIAQ16674 131 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 GDF5OSQ5U4N7 250 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 TCL1BO95988 128 aa9.11□□□□□ -0.95
COL8A1-201ENST00000261037 H3BQ85 93 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 FBXL19-AS1Q494R0 122 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 Q6ZPA2 131 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 CHCHD10Q8WYQ3 142 aaPredicted RBP9.1□□□□□ -0.95
COL8A1-201ENST00000261037 MED13Q9UHV7 2174 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 BRWD1-AS2P59051 145 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 MALRD1Q5VYJ5 2156 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 IGLV2-8P01709 118 aa9.1□□□□□ -0.95
COL8A1-201ENST00000261037 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
COL8A1-201ENST00000261037 SLPIP03973 132 aa9.09□□□□□ -0.95
COL8A1-201ENST00000261037 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms