RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
TROAP-201ENST00000257909 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 KLLNB2CW77 178 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 UBE2E1P51965 193 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 PPDPFQ9H3Y8 114 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 F6UB75 175 aa8.57□□□□□ -1.04
TROAP-201ENST00000257909 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
TROAP-201ENST00000257909 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
TROAP-201ENST00000257909 ZNF56Q15929 161 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 UNQ9165/PRO28630Q6UXU0 137 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 SPANXDQ9BXN6 97 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 TRAV41A0A0B4J266 112 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 A0A0J9YXV3 536 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 IGHV3-30-3P0DP02 117 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 C5orf56Q8N8D9 126 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 LITAFQ99732 161 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 SVEP1Q4LDE5 3571 aa8.56□□□□□ -1.04
TROAP-201ENST00000257909 M0QY20 66 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 PRSS2P07478 247 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
TROAP-201ENST00000257909 FAM74A4Q5TZK3 123 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 TIMM21Q9BVV7 248 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 IGLV4-3A0A075B6K6 122 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 LST1O00453 97 aa8.55□□□□□ -1.04
TROAP-201ENST00000257909 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
TROAP-201ENST00000257909 SAA4P35542 130 aa8.54□□□□□ -1.04
TROAP-201ENST00000257909 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
TROAP-201ENST00000257909 IMUPQ9GZP8 106 aa8.54□□□□□ -1.04
TROAP-201ENST00000257909 I3L3M4 83 aa8.54□□□□□ -1.04
TROAP-201ENST00000257909 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
TROAP-201ENST00000257909 ACYP1P07311 99 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 MIAQ16674 131 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 TRAV25A0A0B4J276 109 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
TROAP-201ENST00000257909 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 RIF1Q5UIP0 2472 aaKnown RBP8.53□□□□□ -1.04
TROAP-201ENST00000257909 ZFHX3Q15911 3703 aa8.53□□□□□ -1.04
TROAP-201ENST00000257909 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.04
TROAP-201ENST00000257909 GRNP28799 593 aaKnown RBP8.52□□□□□ -1.04
TROAP-201ENST00000257909 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.04
TROAP-201ENST00000257909 NRGNQ92686 78 aa8.52□□□□□ -1.04
TROAP-201ENST00000257909 SPTBN2O15020 2390 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 WIPF1O43516 503 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 TRBV12-3P01733 135 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 CLEC2BQ92478 149 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
TROAP-201ENST00000257909 PRRC2AP48634 2157 aaKnown RBP8.52□□□□□ -1.05
TROAP-201ENST00000257909 ASH1LQ9NR48 2969 aaKnown RBP8.51□□□□□ -1.05
TROAP-201ENST00000257909 IGKV3-7A0A075B6H7 116 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 LY6DQ14210 128 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 ADAMTSL4-AS1Q5T5F5 129 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 CITED2Q99967 270 aaPredicted RBP8.51□□□□□ -1.05
TROAP-201ENST00000257909 RHPN1-AS1Q9BWJ2 59 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 MOB4Q9Y3A3 225 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 CACNA1BQ00975 2339 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 TMEM61Q8N0U2 210 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 LINC01587Q99440 93 aa8.51□□□□□ -1.05
TROAP-201ENST00000257909 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
TROAP-201ENST00000257909 CD28P10747 220 aa8.5□□□□□ -1.05
TROAP-201ENST00000257909 TLN1Q9Y490 2541 aaKnown RBP8.5□□□□□ -1.05
TROAP-201ENST00000257909 NPFFO15130 113 aa8.5□□□□□ -1.05
TROAP-201ENST00000257909 LINC00527Q9UJ94 153 aa8.5□□□□□ -1.05
TROAP-201ENST00000257909 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
TROAP-201ENST00000257909 H3BUA1 57 aa8.49□□□□□ -1.05
TROAP-201ENST00000257909 TIMM17BO60830 172 aa8.49□□□□□ -1.05
TROAP-201ENST00000257909 VSIG2Q96IQ7 327 aa8.49□□□□□ -1.05
TROAP-201ENST00000257909 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
TROAP-201ENST00000257909 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
TROAP-201ENST00000257909 TMEM219Q86XT9 240 aa8.48□□□□□ -1.05
TROAP-201ENST00000257909 DAZ1Q9NQZ3 744 aaKnown RBP8.48□□□□□ -1.05
TROAP-201ENST00000257909 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
TROAP-201ENST00000257909 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
TROAP-201ENST00000257909 CDSNQ15517 529 aa8.47□□□□□ -1.05
TROAP-201ENST00000257909 Q6ZSV7 163 aa8.47□□□□□ -1.05
TROAP-201ENST00000257909 MED13LQ71F56 2210 aa8.47□□□□□ -1.05
TROAP-201ENST00000257909 ATP5G1P05496 136 aa8.47□□□□□ -1.05
TROAP-201ENST00000257909 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 IGHV3-11P01762 117 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 NPC2P61916 151 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 LINC00643Q86TS7 51 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 DCANP1Q8TF63 244 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 FAM104AQ969W3 186 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 EDA2RQ9HAV5 297 aa8.46□□□□□ -1.05
TROAP-201ENST00000257909 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.06
TROAP-201ENST00000257909 DNAJC30Q96LL9 226 aa8.45□□□□□ -1.06
TROAP-201ENST00000257909 PTPRQQ9UMZ3 2332 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms