RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 APOMO95445 188 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 ZNF56Q15929 161 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 PSMG3-AS1Q96PY0 264 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 SPAG8Q99932 426 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 COX8CQ7Z4L0 72 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 Q8N1Y9 231 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 Q8N8P6 123 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 CITED2Q99967 270 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
TRAFD1-201ENST00000257604 K7EMT4 169 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 FOXI2Q6ZQN5 318 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 F8P00451 2351 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 VWFP04275 2813 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 HLA-DRB4P13762 266 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 LAGE3Q14657 143 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 HLA-DRB4X5D2U9 266 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
TRAFD1-201ENST00000257604 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 A0A0J9YX75 114 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 E9PLD3 99 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 FSHBP01225 129 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 LRRC75A-AS1Q8N1F1 130 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 HIVEP1P15822 2718 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 K7EQG2 157 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 ATP5LO75964 103 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 TM2D2Q9BX73 214 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
TRAFD1-201ENST00000257604 H7C2G1 150 aa10.86□□□□□ -0.67
TRAFD1-201ENST00000257604 NRACQ8N912 160 aa10.86□□□□□ -0.67
TRAFD1-201ENST00000257604 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
TRAFD1-201ENST00000257604 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 PSMB2P49721 201 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 SMIM20Q8N5G0 67 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 CNFNQ9BYD5 112 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 B5MCH6 92 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 GAGE13Q4V321 117 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 ZFP2Q6ZN57 461 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 SCGB3A1Q96QR1 104 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 MRPL16Q9NX20 251 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 TENM1Q9UKZ4 2725 aa10.85□□□□□ -0.67
TRAFD1-201ENST00000257604 A0A087WX48 190 aa10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 CITED1Q99966 193 aa10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 SUMO2P61956 95 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 RASL10AQ92737 203 aa10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
TRAFD1-201ENST00000257604 IGHV3-16A0A0C4DH30 117 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 LINC01549A6NIU2 74 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 LINC01587Q99440 93 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 OR11H12B2RN74 326 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 F8W1H4 67 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 PROK1P58294 105 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 OR11H2Q8NH07 326 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 P0DMU3 169 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 PEMTQ9UBM1 199 aa10.83□□□□□ -0.68
TRAFD1-201ENST00000257604 CCL24O00175 119 aa10.82□□□□□ -0.68
TRAFD1-201ENST00000257604 IGHV1OR15-1A0A075B7D0 117 aa10.82□□□□□ -0.68
TRAFD1-201ENST00000257604 PRSS29PA6NIE9 313 aa10.82□□□□□ -0.68
TRAFD1-201ENST00000257604 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 KLLNB2CW77 178 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RRN3P1Q2M238 152 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RPL39P62891 51 aaKnown RBP10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 J3QR89 54 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 BRI3O95415 125 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 RNF183Q96D59 192 aa10.81□□□□□ -0.68
TRAFD1-201ENST00000257604 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 RPL35AP18077 110 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 LINC01006Q8NI28 216 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 F8VRH5 84 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 H7C1H1 209 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
TRAFD1-201ENST00000257604 IGHV3-53P01767 116 aa10.79□□□□□ -0.68
TRAFD1-201ENST00000257604 PLNP26678 52 aa10.79□□□□□ -0.68
TRAFD1-201ENST00000257604 MORN3Q6PF18 240 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-201ENST00000257604 C4orf3Q8WVX3 66 aa10.79□□□□□ -0.68
TRAFD1-201ENST00000257604 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
TRAFD1-201ENST00000257604 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms