RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 A0A096LNT2 108 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 A0A0J9YX75 114 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 ENSAO43768 121 aaKnown RBP8.98□□□□□ -0.97
CCNA1-201ENST00000255465 SH2D1AO60880 128 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 MAPK1IP1LQ8NDC0 245 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
CCNA1-201ENST00000255465 Q1RN00 199 aa8.97□□□□□ -0.97
CCNA1-201ENST00000255465 DCANP1Q8TF63 244 aa8.97□□□□□ -0.97
CCNA1-201ENST00000255465 SIRPDQ9H106 197 aa8.97□□□□□ -0.97
CCNA1-201ENST00000255465 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 TRBV7-1A0A0A6YYK4 115 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 C11orf86A6NJI1 115 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 WNT9BO14905 357 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 ERCC8Q13216 396 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 FAM201AQ5SY85 155 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 FAM53AQ6NSI3 398 aaPredicted RBP8.96□□□□□ -0.97
CCNA1-201ENST00000255465 LINC00311Q8N616 119 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 CCL17Q92583 94 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 SMR3AQ99954 134 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 MALRD1Q5VYJ5 2156 aa8.96□□□□□ -0.97
CCNA1-201ENST00000255465 TRBV19A0A075B6N1 114 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 TRIAP1O43715 76 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 HOXA4Q00056 320 aaPredicted RBP8.96□□□□□ -0.98
CCNA1-201ENST00000255465 MLANAQ16655 118 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 FAM216BQ8N7L0 139 aa8.96□□□□□ -0.98
CCNA1-201ENST00000255465 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 ZANQ9Y493 2812 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV3-43A0A0B4J1X8 118 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV1-69DA0A0B4J2H0 117 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV4-61A0A0C4DH41 118 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV3-64DA0A0J9YX35 117 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV3-43DP0DP04 118 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 PDE6HQ13956 83 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 RPL39P5Q59GN2 51 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 NRACQ8N912 160 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
CCNA1-201ENST00000255465 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCNA1-201ENST00000255465 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 SYNJ2BPP57105 145 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 WDR86Q86TI4 376 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 RNF152Q8N8N0 203 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 TLN2Q9Y4G6 2542 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 TRAV41A0A0B4J266 112 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 TMEM178BH3BS89 294 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 BUB3O43684 328 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 LY6G6DO95868 133 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 VMA21Q3ZAQ7 101 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 Q6JHZ5 121 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
CCNA1-201ENST00000255465 ARHGAP32A7KAX9 2087 aa8.93□□□□□ -0.98
CCNA1-201ENST00000255465 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
CCNA1-201ENST00000255465 BCE1O60756 84 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 AMELXQ99217 191 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 TIMM21Q9BVV7 248 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 LAMTOR3Q9UHA4 124 aa8.92□□□□□ -0.98
CCNA1-201ENST00000255465 GRPP07492 148 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
CCNA1-201ENST00000255465 CYSTM1Q9H1C7 97 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 WNK2Q9Y3S1 2297 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
CCNA1-201ENST00000255465 IGHV4-31P0DP07 118 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 Q6ZS46 218 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 C16orf95Q9H693 158 aa8.91□□□□□ -0.98
CCNA1-201ENST00000255465 LEPROTO15243 131 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 PPP1R17O96001 155 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 LMO4P61968 165 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 ZNF826PQ6ZT77 177 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 TMEM167AQ8TBQ9 72 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 C2CD3Q4AC94 2353 aa8.9□□□□□ -0.98
CCNA1-201ENST00000255465 EGR2P11161 476 aaPredicted RBP8.89□□□□□ -0.99
CCNA1-201ENST00000255465 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 SLC50A1Q9BRV3 221 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 RNF7Q9UBF6 113 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 MTORP42345 2549 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 HIVEP2P31629 2446 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 KNCNA6PVL3 124 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 SAA2P0DJI9 122 aaPredicted RBP8.89□□□□□ -0.99
CCNA1-201ENST00000255465 DLX1P56177 255 aa8.89□□□□□ -0.99
CCNA1-201ENST00000255465 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
CCNA1-201ENST00000255465 A0A0U1RRA0 63 aa8.88□□□□□ -0.99
CCNA1-201ENST00000255465 M0R3E3 92 aa8.88□□□□□ -0.99
CCNA1-201ENST00000255465 LHBP01229 141 aa8.88□□□□□ -0.99
CCNA1-201ENST00000255465 SAA1P0DJI8 122 aaPredicted RBP8.88□□□□□ -0.99
CCNA1-201ENST00000255465 MUSTN1Q8IVN3 82 aa8.88□□□□□ -0.99
CCNA1-201ENST00000255465 VSIG2Q96IQ7 327 aa8.88□□□□□ -0.99
CCNA1-201ENST00000255465 SONP18583 2426 aaKnown RBP8.88□□□□□ -0.99
CCNA1-201ENST00000255465 M0R381 172 aa8.87□□□□□ -0.99
CCNA1-201ENST00000255465 CGB3P0DN86 165 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms