RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 ACACBO00763 2458 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 NPC2P61916 151 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 ZC2HC1BQ5TFG8 222 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 C18orf32Q8TCD1 76 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 K7EN84 100 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 KPRPQ5T749 579 aaPredicted RBP6.84□□□□□ -1.31
PDE6A-201ENST00000255266 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.31
PDE6A-201ENST00000255266 STPG4Q8N801 248 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 CITED1Q99966 193 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 F8VRH5 84 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 PRB2P02812 416 aaPredicted RBP6.84□□□□□ -1.31
PDE6A-201ENST00000255266 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 NCOR2Q9Y618 2525 aa6.84□□□□□ -1.31
PDE6A-201ENST00000255266 UBE2AP49459 152 aa6.84□□□□□ -1.32
PDE6A-201ENST00000255266 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.32
PDE6A-201ENST00000255266 PIK3CD-AS1Q5SR53 167 aa6.84□□□□□ -1.32
PDE6A-201ENST00000255266 COX7B2Q8TF08 81 aa6.84□□□□□ -1.32
PDE6A-201ENST00000255266 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 TAL2Q16559 108 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 PYY3Q5JQD4 70 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
PDE6A-201ENST00000255266 LELP1Q5T871 98 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 TRAV8-2A0A0B4J237 113 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 H3BQ85 93 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 REG3AQ06141 175 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 SNAI2O43623 268 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 DEFB1P60022 68 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
PDE6A-201ENST00000255266 MIAQ16674 131 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 DCANP1Q8TF63 244 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
PDE6A-201ENST00000255266 MRGPRG-AS1Q2M3A8 158 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
PDE6A-201ENST00000255266 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 LINC01545Q5VT33 79 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 TIMM17AQ99595 171 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 NPSP0C0P6 89 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 Q8N976 141 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 SCRT2Q9NQ03 307 aa6.81□□□□□ -1.32
PDE6A-201ENST00000255266 NCOA6Q14686 2063 aaPredicted RBP6.81□□□□□ -1.32
PDE6A-201ENST00000255266 CFAP126Q5VTH2 177 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
PDE6A-201ENST00000255266 GAGE2EQ4V326 116 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 GAGE2DQ9UEU5 116 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 FSHBP01225 129 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 FHL3Q13643 280 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
PDE6A-201ENST00000255266 UBE2V1Q13404 147 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 TP53TG3Q9ULZ0 132 aa6.8□□□□□ -1.32
PDE6A-201ENST00000255266 J3QQQ9 107 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 CHCHD7Q9BUK0 85 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 G3V4G9 280 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 ODF3L2Q3SX64 289 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 WFDC10AQ9H1F0 79 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.79□□□□□ -1.32
PDE6A-201ENST00000255266 C19orf71A6NCJ1 209 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
PDE6A-201ENST00000255266 TOMM6Q96B49 74 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 TRBV6-8A0A0A6YYG3 113 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 KLLNB2CW77 178 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 HIST2H2BDQ6DRA6 164 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 PRRC2AP48634 2157 aaKnown RBP6.78□□□□□ -1.32
PDE6A-201ENST00000255266 GDF5OSQ5U4N7 250 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 Q9H8V8 135 aa6.78□□□□□ -1.32
PDE6A-201ENST00000255266 LINC00322Q6ZN03 302 aaPredicted RBP6.78□□□□□ -1.32
PDE6A-201ENST00000255266 IFITM1P13164 125 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 UFSP1Q6NVU6 142 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 CARD19Q96LW7 228 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 SPTAN1Q13813 2472 aaKnown RBP6.77□□□□□ -1.33
PDE6A-201ENST00000255266 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 TRAV12-1A0A0B4J245 112 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 Q6ZVH6 145 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 C10orf91Q5T1B1 145 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 IGF2RP11717 2491 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 IGLV2-18A0A075B6J9 118 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
PDE6A-201ENST00000255266 C20orf203Q8NBC4 194 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 NEXN-AS1Q8NBZ9 246 aa6.77□□□□□ -1.33
PDE6A-201ENST00000255266 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
PDE6A-201ENST00000255266 M0R2N4 97 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms