RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 METTL26Q96S19 204 aa13.8□□□□□ -0.2
PTPN12-201ENST00000248594 PIMREGQ9BSJ6 248 aa13.8□□□□□ -0.2
PTPN12-201ENST00000248594 BUB3O43684 328 aa13.79□□□□□ -0.2
PTPN12-201ENST00000248594 HTN1P15515 57 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 COX8CQ7Z4L0 72 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 J3KT08 172 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 P0DMU3 169 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 FAM231AP0DMU4 169 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 FAM231CP0DMU5 169 aa13.78□□□□□ -0.2
PTPN12-201ENST00000248594 RHOHQ15669 191 aa13.77□□□□□ -0.2
PTPN12-201ENST00000248594 ASCL5Q7RTU5 278 aa13.77□□□□□ -0.2
PTPN12-201ENST00000248594 DPM3Q9P2X0 92 aa13.77□□□□□ -0.2
PTPN12-201ENST00000248594 G3V318 75 aa13.77□□□□□ -0.21
PTPN12-201ENST00000248594 LINC01560Q8TB33 94 aa13.77□□□□□ -0.21
PTPN12-201ENST00000248594 A0A0J9YXY3 114 aa13.77□□□□□ -0.21
PTPN12-201ENST00000248594 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
PTPN12-201ENST00000248594 A0A0B4J2C4 111 aa13.76□□□□□ -0.21
PTPN12-201ENST00000248594 CLPSL1A2RUU4 121 aa13.76□□□□□ -0.21
PTPN12-201ENST00000248594 IGIPA6NJ69 53 aa13.76□□□□□ -0.21
PTPN12-201ENST00000248594 I3L3M4 83 aa13.76□□□□□ -0.21
PTPN12-201ENST00000248594 KIR2DL5BQ8NHK3 375 aa13.76□□□□□ -0.21
PTPN12-201ENST00000248594 RNASE6Q93091 150 aaKnown RBP13.76□□□□□ -0.21
PTPN12-201ENST00000248594 CITED2Q99967 270 aaPredicted RBP13.76□□□□□ -0.21
PTPN12-201ENST00000248594 IGHV3-73A0A0B4J1V6 119 aa13.75□□□□□ -0.21
PTPN12-201ENST00000248594 ZNF672Q499Z4 452 aaPredicted RBP13.75□□□□□ -0.21
PTPN12-201ENST00000248594 ADAMTSL4-AS1Q5T5F5 129 aa13.75□□□□□ -0.21
PTPN12-201ENST00000248594 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
PTPN12-201ENST00000248594 AMELXQ99217 191 aa13.75□□□□□ -0.21
PTPN12-201ENST00000248594 SRSF2Q01130 221 aaKnown RBP13.75□□□□□ -0.21
PTPN12-201ENST00000248594 DSCR8Q96T75 97 aa13.75□□□□□ -0.21
PTPN12-201ENST00000248594 TRAV21A0A0B4J279 112 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 CACNA1AO00555 2505 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 HRNRQ86YZ3 2850 aaPredicted RBP13.74□□□□□ -0.21
PTPN12-201ENST00000248594 VCYO14598 125 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 PSMG3-AS1Q96PY0 264 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 GPHB5Q86YW7 130 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 C20orf173Q96LM9 149 aa13.74□□□□□ -0.21
PTPN12-201ENST00000248594 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 LEPROTO15243 131 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 COL27A1Q8IZC6 1860 aaPredicted RBP13.73□□□□□ -0.21
PTPN12-201ENST00000248594 TIMM21Q9BVV7 248 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 IGKV3D-7A0A0C4DH55 119 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
PTPN12-201ENST00000248594 HRCT1Q6UXD1 115 aa13.73□□□□□ -0.21
PTPN12-201ENST00000248594 WNK1Q9H4A3 2382 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 MUC4Q99102 2169 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 M0R1W7 72 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 SMCR5Q8TEV8 140 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 NDUFA12Q9UI09 145 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 TMEM223A0PJW6 202 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 UQCRQO14949 82 aa13.72□□□□□ -0.21
PTPN12-201ENST00000248594 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.21
PTPN12-201ENST00000248594 IGHV3-30-3P0DP02 117 aa13.71□□□□□ -0.21
PTPN12-201ENST00000248594 C8orf31Q8N9H6 132 aa13.71□□□□□ -0.21
PTPN12-201ENST00000248594 A0A0G2JNJ9 132 aa13.71□□□□□ -0.21
PTPN12-201ENST00000248594 HOXD3P31249 432 aaPredicted RBP13.71□□□□□ -0.21
PTPN12-201ENST00000248594 Q9UFV3 132 aa13.71□□□□□ -0.21
PTPN12-201ENST00000248594 NBL1P41271 181 aa13.71□□□□□ -0.22
PTPN12-201ENST00000248594 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.22
PTPN12-201ENST00000248594 H3BT86 120 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 NXPH4O95158 308 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 SDIM1Q6ZPB5 146 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 F5H768 121 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 CD28P10747 220 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 VMO1Q7Z5L0 202 aa13.7□□□□□ -0.22
PTPN12-201ENST00000248594 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
PTPN12-201ENST00000248594 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
PTPN12-201ENST00000248594 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
PTPN12-201ENST00000248594 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
PTPN12-201ENST00000248594 TMEM141Q96I45 108 aa13.69□□□□□ -0.22
PTPN12-201ENST00000248594 C4orf26Q17RF5 130 aa13.69□□□□□ -0.22
PTPN12-201ENST00000248594 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
PTPN12-201ENST00000248594 IGHV3OR16-10A0A075B7F0 116 aa13.68□□□□□ -0.22
PTPN12-201ENST00000248594 CYSTM1Q9H1C7 97 aa13.68□□□□□ -0.22
PTPN12-201ENST00000248594 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
PTPN12-201ENST00000248594 TMEM190Q8WZ59 177 aa13.67□□□□□ -0.22
PTPN12-201ENST00000248594 HIVEP3Q5T1R4 2406 aa13.67□□□□□ -0.22
PTPN12-201ENST00000248594 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
PTPN12-201ENST00000248594 RNASE3P12724 160 aaKnown RBP13.67□□□□□ -0.22
PTPN12-201ENST00000248594 ZFAND2AQ8N6M9 145 aa13.67□□□□□ -0.22
PTPN12-201ENST00000248594 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
PTPN12-201ENST00000248594 Q9HAA7 133 aa13.67□□□□□ -0.22
PTPN12-201ENST00000248594 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 TRBV7-7A0A0K0K1E9 115 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 TRACP01848 142 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 A0A1B0GX51 115 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 LST1O00453 97 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 ATP6V0E1O15342 81 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 PPP1R17O96001 155 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 DAZ2Q13117 558 aaKnown RBP13.66□□□□□ -0.22
PTPN12-201ENST00000248594 EBI3Q14213 229 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 DAZ4Q86SG3 579 aaKnown RBP13.66□□□□□ -0.22
PTPN12-201ENST00000248594 ZFAND3Q9H8U3 227 aa13.66□□□□□ -0.22
PTPN12-201ENST00000248594 DAZ1Q9NQZ3 744 aaKnown RBP13.66□□□□□ -0.22
PTPN12-201ENST00000248594 DAZ3Q9NR90 486 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms