RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 S100A12P80511 92 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 DNAJC30Q96LL9 226 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 Q6ZTI0 123 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 SPATA12Q7Z6I5 190 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 C18orf15Q96N68 181 aa10.18□□□□□ -0.78
SDF2-201ENST00000247020 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
SDF2-201ENST00000247020 SYS1-DBNDD2H3BUS1 97 aa10.17□□□□□ -0.78
SDF2-201ENST00000247020 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
SDF2-201ENST00000247020 LINC00612Q8N6U2 182 aa10.17□□□□□ -0.78
SDF2-201ENST00000247020 Q8N976 141 aa10.17□□□□□ -0.78
SDF2-201ENST00000247020 C20orf202A1L168 122 aa10.16□□□□□ -0.78
SDF2-201ENST00000247020 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
SDF2-201ENST00000247020 STAB1Q9NY15 2570 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 LYRM9A8MSI8 78 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 ATP5LO75964 103 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 MIFP14174 115 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 DEFB135Q30KP9 77 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 RNF183Q96D59 192 aa10.15□□□□□ -0.78
SDF2-201ENST00000247020 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 I3L3M4 83 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 NUDT3O95989 172 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 RHOHQ15669 191 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 TNFRSF18Q9Y5U5 241 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 ZNF479Q96JC4 524 aa10.14□□□□□ -0.79
SDF2-201ENST00000247020 GAGE12BA1L429 117 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 K7EQD1 137 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 GAGE7O76087 117 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 GAGE12FP0CL80 117 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 GAGE12GP0CL81 117 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 GAGE12IP0CL82 117 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 LINC01545Q5VT33 79 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
SDF2-201ENST00000247020 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
SDF2-201ENST00000247020 G3V4G9 280 aa10.12□□□□□ -0.79
SDF2-201ENST00000247020 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
SDF2-201ENST00000247020 Q6ZSN1 163 aa10.12□□□□□ -0.79
SDF2-201ENST00000247020 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
SDF2-201ENST00000247020 C2orf66Q6UXQ4 117 aa10.11□□□□□ -0.79
SDF2-201ENST00000247020 ANK2Q01484 3957 aa10.11□□□□□ -0.79
SDF2-201ENST00000247020 Q8NAQ8 132 aa10.1□□□□□ -0.79
SDF2-201ENST00000247020 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
SDF2-201ENST00000247020 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 TEX48A0A1B0GUV7 120 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
SDF2-201ENST00000247020 TSHBP01222 138 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 P0DMU3 169 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 FAM231AP0DMU4 169 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 FAM231CP0DMU5 169 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
SDF2-201ENST00000247020 NEGR1Q7Z3B1 354 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 ERASQ7Z444 233 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
SDF2-201ENST00000247020 VAMP8Q9BV40 100 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 EMP1P54849 157 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 PKIAP61925 76 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
SDF2-201ENST00000247020 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
SDF2-201ENST00000247020 TSTD3H0UI37 97 aa10.08□□□□□ -0.8
SDF2-201ENST00000247020 KPRPQ5T749 579 aaPredicted RBP10.08□□□□□ -0.8
SDF2-201ENST00000247020 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
SDF2-201ENST00000247020 MDFIQ99750 246 aa10.08□□□□□ -0.8
SDF2-201ENST00000247020 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
SDF2-201ENST00000247020 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 FHL2Q14192 279 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 FAM222AQ5U5X8 452 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 Q6ZN92 141 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 DAZ4Q86SG3 579 aaKnown RBP10.07□□□□□ -0.8
SDF2-201ENST00000247020 ZNF664Q8N3J9 261 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 DAZ3Q9NR90 486 aaKnown RBP10.07□□□□□ -0.8
SDF2-201ENST00000247020 DNAH3Q8TD57 4116 aa10.07□□□□□ -0.8
SDF2-201ENST00000247020 NPSP0C0P6 89 aa10.06□□□□□ -0.8
SDF2-201ENST00000247020 COTL1Q14019 142 aa10.06□□□□□ -0.8
SDF2-201ENST00000247020 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
SDF2-201ENST00000247020 PRADC1Q9BSG0 188 aa10.06□□□□□ -0.8
SDF2-201ENST00000247020 TRAV9-2A0A087WT02 112 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 H0Y8G0 127 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 PRSS1P07477 247 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 UBE2D3P61077 147 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 UBE2D2P62837 147 aa10.05□□□□□ -0.8
SDF2-201ENST00000247020 IGIPA6NJ69 53 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms