RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RHOHQ15669 191 aa15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 NSUN5P1Q3KNT7 163 aa15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 ZNF256Q9Y2P7 627 aaPredicted RBP15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 TRGV11A0A075B6L2 103 aa15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 SMCPP49901 116 aaPredicted RBP15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 PLEKHB2Q96CS7 222 aa15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 CRYBG3Q68DQ2 2970 aa15.97■□□□□ 0.15
SH2D3A-201ENST00000245908 IGHV4-31P0DP07 118 aa15.96■□□□□ 0.15
SH2D3A-201ENST00000245908 EMP1P54849 157 aa15.96■□□□□ 0.15
SH2D3A-201ENST00000245908 ZNF876PQ49A33 203 aa15.96■□□□□ 0.15
SH2D3A-201ENST00000245908 UTP20O75691 2785 aaKnown RBP15.96■□□□□ 0.15
SH2D3A-201ENST00000245908 SCGB1D4Q6XE38 83 aa15.96■□□□□ 0.14
SH2D3A-201ENST00000245908 Q6ZUT4 128 aa15.95■□□□□ 0.14
SH2D3A-201ENST00000245908 PGPEP1Q9NXJ5 209 aa15.95■□□□□ 0.14
SH2D3A-201ENST00000245908 NFE4Q86UQ8 179 aa15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 KLHL30-AS1Q8NEE0 82 aa15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 VCX2Q9H322 139 aa15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 ANKRD17O75179 2603 aaKnown RBP15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 MT-ATP8P03928 68 aa15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 BEX4Q9NWD9 120 aaPredicted RBP15.94■□□□□ 0.14
SH2D3A-201ENST00000245908 ZNRF2Q8NHG8 242 aa15.93■□□□□ 0.14
SH2D3A-201ENST00000245908 ERG28Q9UKR5 140 aa15.93■□□□□ 0.14
SH2D3A-201ENST00000245908 A6NJY4 79 aa15.93■□□□□ 0.14
SH2D3A-201ENST00000245908 CR1P17927 2039 aa15.93■□□□□ 0.14
SH2D3A-201ENST00000245908 RBMY1A1P0DJD3 496 aaKnown RBP15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 RBMY1CP0DJD4 496 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 RBMY1FQ15415 496 aaKnown RBP15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 A8MTW9 85 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 P0DMU3 169 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 FAM231AP0DMU4 169 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 FAM231CP0DMU5 169 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 XGP55808 180 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 FHL3Q13643 280 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 PPDPFLQ8WWR9 84 aa15.92■□□□□ 0.14
SH2D3A-201ENST00000245908 SLURP1P55000 103 aa15.91■□□□□ 0.14
SH2D3A-201ENST00000245908 A0A0J9YY99 117 aa15.91■□□□□ 0.14
SH2D3A-201ENST00000245908 KNCNA6PVL3 124 aa15.91■□□□□ 0.14
SH2D3A-201ENST00000245908 I3L3M4 83 aa15.91■□□□□ 0.14
SH2D3A-201ENST00000245908 TMEM170BQ5T4T1 132 aa15.91■□□□□ 0.14
SH2D3A-201ENST00000245908 FBN2P35556 2912 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 UBE2D1P51668 147 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 TSPEAR-AS2P59090 65 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 SRSF9Q13242 221 aaKnown RBP eCLIP15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 C20orf203Q8NBC4 194 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 EDA2RQ9HAV5 297 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 DOPEY2Q9Y3R5 2298 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 CSMD2Q7Z408 3487 aa15.9■□□□□ 0.14
SH2D3A-201ENST00000245908 LYRM7Q5U5X0 104 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 C18orf65Q6ZTR6 163 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 Q8N2B8 174 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 MYO18BQ8IUG5 2567 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 UBE2D3P61077 147 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 UBE2D2P62837 147 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 DEFB136Q30KP8 78 aa15.89■□□□□ 0.13
SH2D3A-201ENST00000245908 PRB1P04280 392 aa15.88■□□□□ 0.13
SH2D3A-201ENST00000245908 DEFB131AP59861 70 aa15.88■□□□□ 0.13
SH2D3A-201ENST00000245908 TEN1Q86WV5 123 aa15.88■□□□□ 0.13
SH2D3A-201ENST00000245908 USP9YO00507 2555 aaPredicted RBP15.88■□□□□ 0.13
SH2D3A-201ENST00000245908 TRAV2A0A0B4J234 112 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 PSMB2P49721 201 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 OPRPNQ99935 248 aaPredicted RBP15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 ZANQ9Y493 2812 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 H3BMM0 161 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 RNF183Q96D59 192 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 CARD19Q96LW7 228 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 AMELXQ99217 191 aa15.87■□□□□ 0.13
SH2D3A-201ENST00000245908 PRRC2AP48634 2157 aaKnown RBP15.86■□□□□ 0.13
SH2D3A-201ENST00000245908 SORL1Q92673 2214 aa15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 J3QQQ9 107 aa15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 SBSPONQ8IVN8 264 aa15.85■□□□□ 0.13
SH2D3A-201ENST00000245908 KRTAP10-9P60411 292 aa15.84■□□□□ 0.13
SH2D3A-201ENST00000245908 SLC25A29Q8N8R3 303 aa15.84■□□□□ 0.13
SH2D3A-201ENST00000245908 IGLV4-3A0A075B6K6 122 aa15.84■□□□□ 0.13
SH2D3A-201ENST00000245908 TMEM223A0PJW6 202 aa15.84■□□□□ 0.13
SH2D3A-201ENST00000245908 PEMTQ9UBM1 199 aa15.84■□□□□ 0.13
SH2D3A-201ENST00000245908 LOC107984156A0A0G2JMH3 177 aa15.83■□□□□ 0.13
SH2D3A-201ENST00000245908 ARL17AQ8IVW1 177 aa15.83■□□□□ 0.13
SH2D3A-201ENST00000245908 ACACBO00763 2458 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 LEPROTO15243 131 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 IGHV3-30P01768 117 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 IGHV3-30-5P0DP03 117 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 LGALS3P17931 250 aaKnown RBP15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 DEFB113Q30KQ7 82 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 TMEM61Q8N0U2 210 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 C4orf3Q8WVX3 66 aa15.83■□□□□ 0.12
SH2D3A-201ENST00000245908 TRBV20-1A0A075B6N2 111 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 HTN1P15515 57 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 PIK3CD-AS1Q5SR53 167 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 LRRC75A-AS1Q8N1F1 130 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 PTH2Q96A98 100 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 DUX3Q96PT4 197 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 ANAPC13Q9BS18 74 aa15.82■□□□□ 0.12
SH2D3A-201ENST00000245908 POLQO75417 2590 aa15.81■□□□□ 0.12
SH2D3A-201ENST00000245908 MXRA5Q9NR99 2828 aa15.81■□□□□ 0.12
SH2D3A-201ENST00000245908 M0R2P5 195 aa15.81■□□□□ 0.12
SH2D3A-201ENST00000245908 ZNF22P17026 224 aaPredicted RBP15.81■□□□□ 0.12
SH2D3A-201ENST00000245908 BBC3Q96PG8 261 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms