RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
HIF3A-201ENST00000244302 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
HIF3A-201ENST00000244302 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 M0R381 172 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 EVI2AP22794 236 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 FCER1GP30273 86 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 GTF2H5Q6ZYL4 71 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
HIF3A-201ENST00000244302 C9orf118A6NHY6 69 aa9.36□□□□□ -0.91
HIF3A-201ENST00000244302 ASIPP42127 132 aa9.36□□□□□ -0.91
HIF3A-201ENST00000244302 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 INSP01308 110 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
HIF3A-201ENST00000244302 CLUHP3Q96NS8 147 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 SNAI2O43623 268 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 ATP5LO75964 103 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 OCIAD2Q56VL3 154 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 ZMAT4Q9H898 229 aa9.35□□□□□ -0.91
HIF3A-201ENST00000244302 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 PHLDA3Q9Y5J5 127 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 ERASQ7Z444 233 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 Q8N8P6 123 aa9.34□□□□□ -0.91
HIF3A-201ENST00000244302 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
HIF3A-201ENST00000244302 K7ERU9 68 aa9.33□□□□□ -0.92
HIF3A-201ENST00000244302 GATA1P15976 413 aaPredicted RBP9.33□□□□□ -0.92
HIF3A-201ENST00000244302 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
HIF3A-201ENST00000244302 UFSP1Q6NVU6 142 aa9.33□□□□□ -0.92
HIF3A-201ENST00000244302 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
HIF3A-201ENST00000244302 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 ODF1Q14990 250 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
HIF3A-201ENST00000244302 C9orf85Q96MD7 179 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 A0A087WWL8 130 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 NMUP48645 174 aa9.32□□□□□ -0.92
HIF3A-201ENST00000244302 K7EP34 96 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 DEFB135Q30KP9 77 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 DKK2Q9UBU2 259 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 IGLV2-18A0A075B6J9 118 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 DEFB4AO15263 64 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 IGKCP01834 107 aa9.31□□□□□ -0.92
HIF3A-201ENST00000244302 DPM2O94777 84 aa9.3□□□□□ -0.92
HIF3A-201ENST00000244302 EMP1P54849 157 aa9.3□□□□□ -0.92
HIF3A-201ENST00000244302 C21orf62-AS1Q17RA5 79 aa9.3□□□□□ -0.92
HIF3A-201ENST00000244302 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
HIF3A-201ENST00000244302 MRPL16Q9NX20 251 aaKnown RBP9.3□□□□□ -0.92
HIF3A-201ENST00000244302 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
HIF3A-201ENST00000244302 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
HIF3A-201ENST00000244302 IGHV3-73A0A0B4J1V6 119 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 PRSS1P07477 247 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 ZNF876PQ49A33 203 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 COTL1Q14019 142 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 HHLA3Q9XRX5 114 aa9.29□□□□□ -0.92
HIF3A-201ENST00000244302 H3BUT2 72 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 LINC00315P59091 139 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 LAGE3Q14657 143 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
HIF3A-201ENST00000244302 RETNQ9HD89 108 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 A0A1W2PPM0 123 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 NRACQ8N912 160 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
HIF3A-201ENST00000244302 Q9UF83 564 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 X6R8D5 127 aa9.28□□□□□ -0.92
HIF3A-201ENST00000244302 K7EMI3 77 aa9.27□□□□□ -0.93
HIF3A-201ENST00000244302 SMIM13P0DJ93 91 aa9.27□□□□□ -0.93
HIF3A-201ENST00000244302 NXPH4O95158 308 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 CRYGDP07320 174 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 SMIM17P0DL12 118 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 TAL2Q16559 108 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 Q6ZTI0 123 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 MGPP08493 103 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 FABP2P12104 132 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 PLNP26678 52 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
HIF3A-201ENST00000244302 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms