RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 KIR2DL5BQ8NHK3 375 aa11.4□□□□□ -0.59
HOXC12-201ENST00000243103 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
HOXC12-201ENST00000243103 RNF152Q8N8N0 203 aa11.39□□□□□ -0.59
HOXC12-201ENST00000243103 RHOHQ15669 191 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 Q6ZS92 163 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 COX6CP09669 75 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 BRD3OSQ6XYD6 125 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 M0R2P5 195 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
HOXC12-201ENST00000243103 BUB1B-PAK6H3BSN5 160 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 IGHG4P01861 327 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
HOXC12-201ENST00000243103 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 NXPH4O95158 308 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 RNASE1P07998 156 aaKnown RBP11.37□□□□□ -0.59
HOXC12-201ENST00000243103 GATA4P43694 442 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 MAPK1IP1LQ8NDC0 245 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 KLK9Q9UKQ9 250 aa11.37□□□□□ -0.59
HOXC12-201ENST00000243103 EIF4EBP3O60516 100 aaPredicted RBP11.37□□□□□ -0.59
HOXC12-201ENST00000243103 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
HOXC12-201ENST00000243103 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 PIFOQ8TCI5 191 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 LGALS9O00182 355 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 NBR2O15453 112 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 MSRB2Q9Y3D2 182 aa11.36□□□□□ -0.59
HOXC12-201ENST00000243103 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 H7C423 109 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 CRYGDP07320 174 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 IGHV7-4-1A0A0J9YVY3 117 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 CTSGP08311 255 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 Q8NA96 180 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 Q9HAA7 133 aa11.35□□□□□ -0.59
HOXC12-201ENST00000243103 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 A0A087WVE0 104 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 CHD6Q8TD26 2715 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 M0R1W7 72 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 C4orf26Q17RF5 130 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 LINC01587Q99440 93 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
HOXC12-201ENST00000243103 TRBV6-1A0A0K0K1D8 114 aa11.33□□□□□ -0.6
HOXC12-201ENST00000243103 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
HOXC12-201ENST00000243103 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
HOXC12-201ENST00000243103 TSHBP01222 138 aa11.33□□□□□ -0.6
HOXC12-201ENST00000243103 HIST1H4AP62805 103 aaKnown RBP11.33□□□□□ -0.6
HOXC12-201ENST00000243103 ICOSQ9Y6W8 199 aa11.33□□□□□ -0.6
HOXC12-201ENST00000243103 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
HOXC12-201ENST00000243103 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 PDE6HQ13956 83 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 IGLV4-69A0A075B6H9 119 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 CLPSL1A2RUU4 121 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 NDUFA7O95182 113 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 COX6B1P14854 86 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
HOXC12-201ENST00000243103 IGHV3-38A0A0C4DH36 116 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 PRM2P04554 102 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 PIP4P1Q86T03 277 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 P0DMU3 169 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 LINC01559Q495D7 138 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 C10orf105Q8TEF2 133 aa11.31□□□□□ -0.6
HOXC12-201ENST00000243103 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
HOXC12-201ENST00000243103 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 CRYGBP07316 175 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 C5orf47Q569G3 176 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 TRAV12-1A0A0B4J245 112 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 B9A039 149 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 NRGNQ92686 78 aa11.3□□□□□ -0.6
HOXC12-201ENST00000243103 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
HOXC12-201ENST00000243103 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
HOXC12-201ENST00000243103 I3L3M4 83 aa11.29□□□□□ -0.6
HOXC12-201ENST00000243103 CD28P10747 220 aa11.29□□□□□ -0.6
HOXC12-201ENST00000243103 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
HOXC12-201ENST00000243103 WFDC9Q8NEX5 89 aa11.28□□□□□ -0.6
HOXC12-201ENST00000243103 METTL26Q96S19 204 aa11.28□□□□□ -0.6
HOXC12-201ENST00000243103 IGFL2Q6UWQ7 119 aa11.28□□□□□ -0.6
HOXC12-201ENST00000243103 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
HOXC12-201ENST00000243103 A0A1B0GX51 115 aa11.27□□□□□ -0.6
HOXC12-201ENST00000243103 TIMM21Q9BVV7 248 aa11.27□□□□□ -0.6
HOXC12-201ENST00000243103 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.6
HOXC12-201ENST00000243103 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
HOXC12-201ENST00000243103 ZFP36P26651 326 aaKnown RBP11.27□□□□□ -0.61
HOXC12-201ENST00000243103 SUMO4Q6EEV6 95 aa11.27□□□□□ -0.61
HOXC12-201ENST00000243103 VMO1Q7Z5L0 202 aa11.27□□□□□ -0.61
HOXC12-201ENST00000243103 MUC4Q99102 2169 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms