RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 IGLV3-9A0A075B6K5 115 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 MDS2Q8NDY4 140 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
VAMP4-201ENST00000236192 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
VAMP4-201ENST00000236192 HCFC1P51610 2035 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 NDUFA1O15239 70 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 LYRM9A8MSI8 78 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 NDUFA4O00483 81 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 LINC00574Q9H8X3 128 aa9.73□□□□□ -0.85
VAMP4-201ENST00000236192 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
VAMP4-201ENST00000236192 LYNX1G3V0Z9 82 aa9.72□□□□□ -0.85
VAMP4-201ENST00000236192 LYNX1P0DP58 116 aa9.72□□□□□ -0.85
VAMP4-201ENST00000236192 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
VAMP4-201ENST00000236192 ZNF318Q5VUA4 2279 aa9.72□□□□□ -0.85
VAMP4-201ENST00000236192 EML5Q05BV3 1969 aa9.71□□□□□ -0.85
VAMP4-201ENST00000236192 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.85
VAMP4-201ENST00000236192 INSP01308 110 aa9.71□□□□□ -0.85
VAMP4-201ENST00000236192 COL4A6Q14031 1691 aa9.71□□□□□ -0.85
VAMP4-201ENST00000236192 COX6B1P14854 86 aa9.71□□□□□ -0.86
VAMP4-201ENST00000236192 SS18Q15532 418 aa9.71□□□□□ -0.86
VAMP4-201ENST00000236192 FDCSPQ8NFU4 85 aa9.71□□□□□ -0.86
VAMP4-201ENST00000236192 IGIPA6NJ69 53 aa9.71□□□□□ -0.86
VAMP4-201ENST00000236192 ZNF883P0CG24 379 aa9.71□□□□□ -0.86
VAMP4-201ENST00000236192 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 NPBQ8NG41 125 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 TRGV1A0A0A0MS02 117 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 MIFP14174 115 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 SVILO95425 2214 aa9.7□□□□□ -0.86
VAMP4-201ENST00000236192 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 FSTL3O95633 263 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 IGHV3-16A0A0C4DH30 117 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 KAAG1Q9UBP8 84 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 TRBV27A0A0K0K1C4 114 aa9.69□□□□□ -0.86
VAMP4-201ENST00000236192 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
VAMP4-201ENST00000236192 CCKP06307 115 aa9.68□□□□□ -0.86
VAMP4-201ENST00000236192 OVOL3O00110 214 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 PRSS33Q8NF86 280 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 NCKAP5O14513 1909 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 IGHV3OR16-10A0A075B7F0 116 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 CPAMD8Q8IZJ3 1885 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 SIRPDQ9H106 197 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 G3V318 75 aa9.67□□□□□ -0.86
VAMP4-201ENST00000236192 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 NREPQ16612 68 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 IGHV4OR15-8A0A075B7B6 117 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 A0A087WW49 117 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 SLPIP03973 132 aa9.66□□□□□ -0.86
VAMP4-201ENST00000236192 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
VAMP4-201ENST00000236192 ZNF672Q499Z4 452 aaPredicted RBP9.65□□□□□ -0.86
VAMP4-201ENST00000236192 C11orf21Q9P2W6 132 aa9.65□□□□□ -0.86
VAMP4-201ENST00000236192 EXPH5Q8NEV8 1989 aa9.65□□□□□ -0.86
VAMP4-201ENST00000236192 CRYGDP07320 174 aa9.65□□□□□ -0.86
VAMP4-201ENST00000236192 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.87
VAMP4-201ENST00000236192 STHQ8IWL8 128 aa9.65□□□□□ -0.87
VAMP4-201ENST00000236192 SMAD5-AS1Q9Y6J3 95 aa9.65□□□□□ -0.87
VAMP4-201ENST00000236192 TPRP12270 2363 aaKnown RBP9.64□□□□□ -0.87
VAMP4-201ENST00000236192 Q6ZSV7 163 aa9.64□□□□□ -0.87
VAMP4-201ENST00000236192 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
VAMP4-201ENST00000236192 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
VAMP4-201ENST00000236192 DOCK7Q96N67 2140 aa9.64□□□□□ -0.87
VAMP4-201ENST00000236192 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
VAMP4-201ENST00000236192 EPOPA6NHQ4 379 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 POM121L12Q8N7R1 296 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 MP68P56378 58 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 GNLYP22749 145 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 UBE2BP63146 152 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 DCANP1Q8TF63 244 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 AGRNO00468 2067 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 ASXL3Q9C0F0 2248 aa9.63□□□□□ -0.87
VAMP4-201ENST00000236192 ZGRF1Q86YA3 2104 aa9.62□□□□□ -0.87
VAMP4-201ENST00000236192 COL5A1P20908 1838 aaPredicted RBP9.62□□□□□ -0.87
VAMP4-201ENST00000236192 A8MZ25 164 aa9.62□□□□□ -0.87
VAMP4-201ENST00000236192 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
VAMP4-201ENST00000236192 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
VAMP4-201ENST00000236192 LINC00846Q9NV44 126 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 WISP2O76076 250 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 LINC01560Q8TB33 94 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 M0QY20 66 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
VAMP4-201ENST00000236192 EDN2P20800 178 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 TSHBP01222 138 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 IGLV1-47P01700 117 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 RUSC1-AS1Q66K80 236 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 RMI2Q96E14 147 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 DNAJC13O75165 2243 aa9.6□□□□□ -0.87
VAMP4-201ENST00000236192 UBE2AP49459 152 aa9.59□□□□□ -0.87
VAMP4-201ENST00000236192 C11orf44Q8N8P7 122 aa9.59□□□□□ -0.87
VAMP4-201ENST00000236192 IGHV7-81A0A0B4J1V7 117 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms