RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SIVA1O15304 175 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
SF3B6-201ENST00000233468 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
SF3B6-201ENST00000233468 IFITM2Q01629 132 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 PNRC1Q12796 327 aaPredicted RBP7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GAGE1Q13065 139 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GAGE4Q13068 117 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GAGE5Q13069 117 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GAGE13Q4V321 117 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 GTSF1LQ9H1H1 148 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 DPH3P1Q9H4G8 78 aa7.77□□□□□ -1.17
SF3B6-201ENST00000233468 A0A087WWC5 75 aa7.76□□□□□ -1.17
SF3B6-201ENST00000233468 NBDYA0A0U1RRE5 68 aa7.76□□□□□ -1.17
SF3B6-201ENST00000233468 M0R2N4 97 aa7.76□□□□□ -1.17
SF3B6-201ENST00000233468 Q6ZSN1 163 aa7.76□□□□□ -1.17
SF3B6-201ENST00000233468 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 HIGD1CA8MV81 97 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 PPP1R2P9O14990 202 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 MGPP08493 103 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 EVI2AP22794 236 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 OR10J3Q5JRS4 329 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 NAT8BQ9UHF3 227 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 DNAH2Q9P225 4427 aa7.75□□□□□ -1.17
SF3B6-201ENST00000233468 A0A1B0GUT8 65 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 RIGQ13278 110 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 TMEM97Q5BJF2 176 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 LELP1Q5T871 98 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 C1orf134Q5TEV5 83 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 Q6ZR54 194 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 LINC00336Q6ZUF6 198 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 C10orf126Q8N4M7 172 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 DNAJC30Q96LL9 226 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 MSRB1Q9NZV6 116 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 KIF25-AS1Q9Y6Z4 181 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 V9GYV3 84 aa7.74□□□□□ -1.17
SF3B6-201ENST00000233468 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
SF3B6-201ENST00000233468 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
SF3B6-201ENST00000233468 FRZBQ92765 325 aa7.73□□□□□ -1.17
SF3B6-201ENST00000233468 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
SF3B6-201ENST00000233468 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
SF3B6-201ENST00000233468 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
SF3B6-201ENST00000233468 PKD1P98161 4303 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 IGHV3-38A0A0C4DH36 116 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 A0A1B0GW15 77 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 S100A8P05109 93 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 LINC00315P59091 139 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 UBE2D3P61077 147 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 UBE2D2P62837 147 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 KCNIP4Q6PIL6 250 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 NEXN-AS1Q8NBZ9 246 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 ANAPC16Q96DE5 110 aa7.72□□□□□ -1.17
SF3B6-201ENST00000233468 SMIM27A0A1W2PRY6 76 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 TMEM218A2RU14 115 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 M0QY20 66 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 PKIAP61925 76 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 SUMO4Q6EEV6 95 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 COMMD7Q86VX2 200 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 C6orf223Q8N319 242 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 NUP35Q8NFH5 326 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.71□□□□□ -1.18
SF3B6-201ENST00000233468 URGCP-MRPS24S4R325 110 aa7.71□□□□□ -1.18
SF3B6-201ENST00000233468 F8W036 122 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 RTL8CO15255 209 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 LINC01556Q5JQF7 62 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 NFE4Q86UQ8 179 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 WFDC10BQ8IUB3 73 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 TMEM191AQ9H0A3 160 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 NIT2Q9NQR4 276 aa7.7□□□□□ -1.18
SF3B6-201ENST00000233468 LINC00862A6NCI5 91 aa7.69□□□□□ -1.18
SF3B6-201ENST00000233468 PPP1R17O96001 155 aa7.69□□□□□ -1.18
SF3B6-201ENST00000233468 SEC11CQ9BY50 192 aa7.69□□□□□ -1.18
SF3B6-201ENST00000233468 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
SF3B6-201ENST00000233468 NACAE9PAV3 2078 aa7.69□□□□□ -1.18
SF3B6-201ENST00000233468 ELOBQ15370 118 aa7.68□□□□□ -1.18
SF3B6-201ENST00000233468 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
SF3B6-201ENST00000233468 MRAP2Q96G30 205 aa7.68□□□□□ -1.18
SF3B6-201ENST00000233468 CHCHD7Q9BUK0 85 aa7.68□□□□□ -1.18
SF3B6-201ENST00000233468 Q9UF83 564 aa7.68□□□□□ -1.18
SF3B6-201ENST00000233468 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
SF3B6-201ENST00000233468 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 A0A087WX48 190 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 PRSS29PA6NIE9 313 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 ATP5L2Q7Z4Y8 100 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 CTDSP1Q9GZU7 261 aa7.67□□□□□ -1.18
SF3B6-201ENST00000233468 ABCA13Q86UQ4 5058 aa7.66□□□□□ -1.18
SF3B6-201ENST00000233468 TMEM262E9PQX1 116 aa7.66□□□□□ -1.18
SF3B6-201ENST00000233468 CAMPP49913 170 aa7.66□□□□□ -1.18
SF3B6-201ENST00000233468 HBBP68871 147 aa7.66□□□□□ -1.18
SF3B6-201ENST00000233468 GATD1Q8NB37 220 aa7.66□□□□□ -1.18
SF3B6-201ENST00000233468 IMMP2LQ96T52 175 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms