RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ATOX1O00244 68 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
NEK4-201ENST00000233027 Q6ZUT4 128 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 LINC01548A6NM66 108 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 K7EMT4 169 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 WFDC9Q8NEX5 89 aa10.19□□□□□ -0.78
NEK4-201ENST00000233027 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 CRIP3Q6Q6R5 217 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 GPHB5Q86YW7 130 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 NREPQ16612 68 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 GPR179Q6PRD1 2367 aa10.18□□□□□ -0.78
NEK4-201ENST00000233027 CRYGBP07316 175 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 DEFB135Q30KP9 77 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 F8W735 103 aaPredicted RBP10.17□□□□□ -0.78
NEK4-201ENST00000233027 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 SHANK1Q9Y566 2161 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
NEK4-201ENST00000233027 A0A0J9YX75 114 aa10.16□□□□□ -0.78
NEK4-201ENST00000233027 NDUFA1O15239 70 aa10.16□□□□□ -0.78
NEK4-201ENST00000233027 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
NEK4-201ENST00000233027 ZGRF1Q86YA3 2104 aa10.15□□□□□ -0.78
NEK4-201ENST00000233027 KLK12Q9UKR0 248 aa10.15□□□□□ -0.78
NEK4-201ENST00000233027 SPAG11BQ08648 103 aa10.15□□□□□ -0.78
NEK4-201ENST00000233027 IGF1P05019 195 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 TMEM131Q92545 1883 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 MIAQ16674 131 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 IGF2-ASQ6U949 168 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 TRAV26-1A0A087WT03 109 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 A0A0J9YXY3 114 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 PCNX1Q96RV3 2341 aa10.14□□□□□ -0.79
NEK4-201ENST00000233027 H3BT86 120 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 MAP6D1Q9H9H5 199 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 A6NDX4 124 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 CCL18P55774 89 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 DIRC1Q969H9 104 aa10.13□□□□□ -0.79
NEK4-201ENST00000233027 J3KT08 172 aa10.12□□□□□ -0.79
NEK4-201ENST00000233027 JMJD7-PLA2G4BH0Y9G9 81 aa10.12□□□□□ -0.79
NEK4-201ENST00000233027 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
NEK4-201ENST00000233027 TMEM263Q8WUH6 116 aaKnown RBP10.12□□□□□ -0.79
NEK4-201ENST00000233027 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
NEK4-201ENST00000233027 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 EIF4EBP1Q13541 118 aaPredicted RBP10.11□□□□□ -0.79
NEK4-201ENST00000233027 ABCA4P78363 2273 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 TEX49A0A1B0GTD5 131 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 RNF183Q96D59 192 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 MLST8Q9BVC4 326 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 MBD6Q96DN6 1003 aa10.11□□□□□ -0.79
NEK4-201ENST00000233027 UBE2AP49459 152 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 Q8NA96 180 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 TMEM256-PLSCR3K7ERE1 68 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 MP68P56378 58 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 CRIP1P50238 77 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 C22orf34Q6ZV56 151 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
NEK4-201ENST00000233027 Q6ZTI0 123 aa10.09□□□□□ -0.79
NEK4-201ENST00000233027 CXCL5P42830 114 aa10.09□□□□□ -0.79
NEK4-201ENST00000233027 YPEL4Q96NS1 127 aa10.09□□□□□ -0.79
NEK4-201ENST00000233027 DAZAP2Q15038 168 aaPredicted RBP10.09□□□□□ -0.79
NEK4-201ENST00000233027 CACNA1GO43497 2377 aa10.08□□□□□ -0.8
NEK4-201ENST00000233027 SPTAN1Q13813 2472 aaKnown RBP10.08□□□□□ -0.8
NEK4-201ENST00000233027 NDUFB1O75438 58 aa10.08□□□□□ -0.8
NEK4-201ENST00000233027 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 SLPIP03973 132 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 TMEM89A2RUT3 159 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
NEK4-201ENST00000233027 NOTCH3Q9UM47 2321 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 MYCNOSP40205 109 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 H3BQ85 93 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 LINC00574Q9H8X3 128 aa10.07□□□□□ -0.8
NEK4-201ENST00000233027 RIF1Q5UIP0 2472 aaKnown RBP10.06□□□□□ -0.8
NEK4-201ENST00000233027 ALPK3Q96L96 1907 aa10.06□□□□□ -0.8
NEK4-201ENST00000233027 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
NEK4-201ENST00000233027 COX7BP24311 80 aa10.06□□□□□ -0.8
NEK4-201ENST00000233027 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
NEK4-201ENST00000233027 RNF185Q96GF1 192 aa10.06□□□□□ -0.8
NEK4-201ENST00000233027 PROK1P58294 105 aa10.05□□□□□ -0.8
NEK4-201ENST00000233027 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
NEK4-201ENST00000233027 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
NEK4-201ENST00000233027 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms