RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 UBE2D1P51668 147 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 RPL11P62913 178 aaKnown RBP7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 TRAV41A0A0B4J266 112 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV3-11P01762 117 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 ELANEP08246 267 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 MUC4Q99102 2169 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 AKAP9Q99996 3911 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 DNAH3Q8TD57 4116 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 ATXN8Q156A1 80 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 ITLN2Q8WWU7 325 aaPredicted RBP7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 BAALCQ8WXS3 180 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 CUBNO60494 3623 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 SUMO2P61956 95 aaKnown RBP7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 RPL39P62891 51 aaKnown RBP7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 FAM74A4Q5TZK3 123 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 CLEC2BQ92478 149 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 PHLDA3Q9Y5J5 127 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 UBR5O95071 2799 aaPredicted RBP7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 A0A0J9YY99 117 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 GNRH2O43555 120 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 MYO18BQ8IUG5 2567 aa7.07□□□□□ -1.28
HLA-DOA-201ENST00000229829 FLNCQ14315 2725 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 ZNF22P17026 224 aaPredicted RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 LY6EQ16553 131 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 MRPL53Q96EL3 112 aaKnown RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 ODF3Q96PU9 254 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 NOTCH2Q04721 2471 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 C19orf84I3L1E1 186 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 EDN2P20800 178 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 LY6DQ14210 128 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 CEMP1Q6PRD7 247 aaPredicted RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 ZANQ9Y493 2812 aa7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
HLA-DOA-201ENST00000229829 C19orf54Q5BKX5 351 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 Q6ZSV7 163 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 CFAP46Q8IYW2 2715 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 RNF223E7ERA6 249 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 C9orf139Q6ZV77 190 aa7.05□□□□□ -1.28
HLA-DOA-201ENST00000229829 J3QQQ9 107 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 HERVK_113P63121 156 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 TMEM101Q96IK0 257 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 DUX5Q96PT3 197 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 MOB4Q9Y3A3 225 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 SOCS3O14543 225 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 PLA2G2AP14555 144 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 COX6CP09669 75 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 BLCAPP62952 87 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 NEXN-AS1Q8NBZ9 246 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 JPT2Q9H910 190 aa7.04□□□□□ -1.28
HLA-DOA-201ENST00000229829 TRAV21A0A0B4J279 112 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV3-33P01772 117 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV4-38-2P0DP08 117 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 RNASE3P12724 160 aaKnown RBP7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 LINC00477Q96M19 166 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 CENPEQ02224 2701 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 A0A087WWL8 130 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 DPH3P1Q9H4G8 78 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 FAM223BA6NKX1 122 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 FAM223AQ8IWN6 122 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 ZNF843Q8N446 348 aa7.03□□□□□ -1.28
HLA-DOA-201ENST00000229829 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 SMIM9A6NGZ8 99 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRIAP1O43715 76 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 DAND5Q8N907 189 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGHV1-69DA0A0B4J2H0 117 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGHV4-61A0A0C4DH41 118 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 IGHV1-69P01742 117 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 ZNF580Q9UK33 172 aa7.02□□□□□ -1.29
HLA-DOA-201ENST00000229829 USP9YO00507 2555 aaPredicted RBP7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 LGALS9O00182 355 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 NDUFA4O00483 81 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 RHPN1-AS1Q9BWJ2 59 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 H3BUX3 64 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 OVOL1O14753 267 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 NSUN5P1Q3KNT7 163 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 PRRC2AP48634 2157 aaKnown RBP7.01□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 hADV29S1A0JD25 119 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 CRYGDP07320 174 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 KHDC1LQ5JSQ8 128 aa7□□□□□ -1.29
HLA-DOA-201ENST00000229829 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms