RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LGALS9O00182 355 aa13.23□□□□□ -0.29
CDKN1B-201ENST00000228872 BEX4Q9NWD9 120 aaPredicted RBP13.23□□□□□ -0.29
CDKN1B-201ENST00000228872 COL12A1Q99715 3063 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 OVOL1O14753 267 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 TRIAP1O43715 76 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 JPT2Q9H910 190 aa13.22□□□□□ -0.29
CDKN1B-201ENST00000228872 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.29
CDKN1B-201ENST00000228872 FAM19A4Q96LR4 140 aa13.21□□□□□ -0.29
CDKN1B-201ENST00000228872 MINOS1-NBL1R4GNA1 71 aa13.21□□□□□ -0.29
CDKN1B-201ENST00000228872 SDHAF1A6NFY7 115 aa13.21□□□□□ -0.3
CDKN1B-201ENST00000228872 IGHV3-64A0A075B6Q5 118 aa13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 M0R2P5 195 aa13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 C1orf122Q6ZSJ8 110 aa13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 MDFICQ9P1T7 246 aa13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 SPTAN1Q13813 2472 aaKnown RBP13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
CDKN1B-201ENST00000228872 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
CDKN1B-201ENST00000228872 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
CDKN1B-201ENST00000228872 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
CDKN1B-201ENST00000228872 APRG1Q8IVJ8 170 aa13.19□□□□□ -0.3
CDKN1B-201ENST00000228872 VPS13CQ709C8 3753 aa13.19□□□□□ -0.3
CDKN1B-201ENST00000228872 TRBV27A0A0K0K1C4 114 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 SOCS3O14543 225 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 ZNF22P17026 224 aaPredicted RBP13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 CCL19Q99731 98 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 ZFYVE26Q68DK2 2539 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 A0A087WWL8 130 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 A0A0J9YX75 114 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 IGHV1-69P01742 117 aa13.18□□□□□ -0.3
CDKN1B-201ENST00000228872 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 F5H697 171 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 F6UB75 175 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 MUC4Q99102 2169 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 A0A0J9YXY3 114 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 H7C423 109 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 USP9XQ93008 2570 aaPredicted RBP13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 ZNF462Q96JM2 2506 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 FLNCQ14315 2725 aa13.17□□□□□ -0.3
CDKN1B-201ENST00000228872 EPG5Q9HCE0 2579 aa13.16□□□□□ -0.3
CDKN1B-201ENST00000228872 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
CDKN1B-201ENST00000228872 ZNF580Q9UK33 172 aa13.16□□□□□ -0.3
CDKN1B-201ENST00000228872 ZNF256Q9Y2P7 627 aaPredicted RBP13.16□□□□□ -0.3
CDKN1B-201ENST00000228872 H3BT86 120 aa13.15□□□□□ -0.3
CDKN1B-201ENST00000228872 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
CDKN1B-201ENST00000228872 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.31
CDKN1B-201ENST00000228872 ZNF56Q15929 161 aa13.14□□□□□ -0.31
CDKN1B-201ENST00000228872 LITAFQ99732 161 aa13.14□□□□□ -0.31
CDKN1B-201ENST00000228872 UBE2E1P51965 193 aa13.14□□□□□ -0.31
CDKN1B-201ENST00000228872 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
CDKN1B-201ENST00000228872 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
CDKN1B-201ENST00000228872 A0A0J9YXV3 536 aa13.13□□□□□ -0.31
CDKN1B-201ENST00000228872 FAM240AA0A1B0GVK7 77 aa13.13□□□□□ -0.31
CDKN1B-201ENST00000228872 RHOHQ15669 191 aa13.13□□□□□ -0.31
CDKN1B-201ENST00000228872 LMO4P61968 165 aa13.13□□□□□ -0.31
CDKN1B-201ENST00000228872 CHCHD5Q9BSY4 110 aa13.13□□□□□ -0.31
CDKN1B-201ENST00000228872 SIRPDQ9H106 197 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 BRI3O95415 125 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 ZFHX3Q15911 3703 aa13.12□□□□□ -0.31
CDKN1B-201ENST00000228872 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
CDKN1B-201ENST00000228872 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
CDKN1B-201ENST00000228872 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
CDKN1B-201ENST00000228872 FAM74A4Q5TZK3 123 aa13.11□□□□□ -0.31
CDKN1B-201ENST00000228872 PIMREGQ9BSJ6 248 aa13.11□□□□□ -0.31
CDKN1B-201ENST00000228872 MYO18BQ8IUG5 2567 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 CLEC2BQ92478 149 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 LINC01587Q99440 93 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 PRSS2P07478 247 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 C10orf105Q8TEF2 133 aa13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
CDKN1B-201ENST00000228872 KLLNB2CW77 178 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 COX6CP09669 75 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 M0QY20 66 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 TMEM95Q3KNT9 176 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 CRYBG3Q68DQ2 2970 aa13.09□□□□□ -0.31
CDKN1B-201ENST00000228872 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.31
CDKN1B-201ENST00000228872 C3orf56Q8N813 242 aa13.08□□□□□ -0.31
CDKN1B-201ENST00000228872 TMEM126AQ9H061 195 aa13.08□□□□□ -0.31
CDKN1B-201ENST00000228872 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 LST1O00453 97 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 ATP5J2P56134 94 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 ADAMTSL4-AS1Q5T5F5 129 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 Q6ZSV7 163 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
CDKN1B-201ENST00000228872 SPXQ9BT56 116 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 TIMM21Q9BVV7 248 aa13.07□□□□□ -0.32
CDKN1B-201ENST00000228872 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms