RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.72
SF1-201ENST00000227503 HIVEP3Q5T1R4 2406 aa10.52□□□□□ -0.73
SF1-201ENST00000227503 LGALS9O00182 355 aa10.52□□□□□ -0.73
SF1-201ENST00000227503 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
SF1-201ENST00000227503 BPESC1Q9GZL8 116 aa10.52□□□□□ -0.73
SF1-201ENST00000227503 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
SF1-201ENST00000227503 A8MZ25 164 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 H7C423 109 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 CEMP1Q6PRD7 247 aaPredicted RBP10.51□□□□□ -0.73
SF1-201ENST00000227503 ZFYVE26Q68DK2 2539 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.732e-8■■■■□ 23.7
SF1-201ENST00000227503 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 SDHAF1A6NFY7 115 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
SF1-201ENST00000227503 OR10J6PQ8NGY7 276 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 VPREB3Q9UKI3 123 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 C19orf54Q5BKX5 351 aa10.51□□□□□ -0.73
SF1-201ENST00000227503 CRYBG3Q68DQ2 2970 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 UTP20O75691 2785 aaKnown RBP10.5□□□□□ -0.73
SF1-201ENST00000227503 SPG11Q96JI7 2443 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 LINC00315P59091 139 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 SPXQ9BT56 116 aa10.5□□□□□ -0.73
SF1-201ENST00000227503 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
SF1-201ENST00000227503 P0DMU3 169 aa10.49□□□□□ -0.73
SF1-201ENST00000227503 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
SF1-201ENST00000227503 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
SF1-201ENST00000227503 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
SF1-201ENST00000227503 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
SF1-201ENST00000227503 CFAP46Q8IYW2 2715 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 LOC107984640A0A0U1RRK4 108 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 TRBV12-3P01733 135 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 PAPPA-AS1Q5QFB9 102 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 ADAMTSL4-AS1Q5T5F5 129 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 UNQ9165/PRO28630Q6UXU0 137 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 DAND5Q8N907 189 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 ITLN2Q8WWU7 325 aaPredicted RBP10.48□□□□□ -0.73
SF1-201ENST00000227503 PKD1L2Q7Z442 2459 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 TRAV41A0A0B4J266 112 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 A0A0B4J2C4 111 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 FAM236AA0A1B0GUQ0 79 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 FAM236BA0A1B0GV22 79 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 TMEM223A0PJW6 202 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 M0QXV9 152 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 POLR2KP53803 58 aaKnown RBP10.48□□□□□ -0.73
SF1-201ENST00000227503 Q6Q795 121 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 LINC01587Q99440 93 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
SF1-201ENST00000227503 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
SF1-201ENST00000227503 CENPEQ02224 2701 aa10.47□□□□□ -0.73
SF1-201ENST00000227503 MRPL23Q16540 153 aaKnown RBP10.47□□□□□ -0.73
SF1-201ENST00000227503 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
SF1-201ENST00000227503 FLNCQ14315 2725 aa10.47□□□□□ -0.73
SF1-201ENST00000227503 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
SF1-201ENST00000227503 MOB4Q9Y3A3 225 aa10.47□□□□□ -0.73
SF1-201ENST00000227503 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
SF1-201ENST00000227503 LINC00694P0DN24 101 aa10.46□□□□□ -0.73
SF1-201ENST00000227503 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
SF1-201ENST00000227503 LINC00477Q96M19 166 aa10.46□□□□□ -0.73
SF1-201ENST00000227503 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.74
SF1-201ENST00000227503 IGHV1-69DA0A0B4J2H0 117 aa10.46□□□□□ -0.74
SF1-201ENST00000227503 LEPROTO15243 131 aa10.46□□□□□ -0.74
SF1-201ENST00000227503 C9orf139Q6ZV77 190 aa10.46□□□□□ -0.74
SF1-201ENST00000227503 VCYO14598 125 aa10.45□□□□□ -0.74
SF1-201ENST00000227503 TMEM95Q3KNT9 176 aa10.45□□□□□ -0.74
SF1-201ENST00000227503 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
SF1-201ENST00000227503 TRAV12-3A0A0B4J271 114 aa10.45□□□□□ -0.74
SF1-201ENST00000227503 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
SF1-201ENST00000227503 IGKV3-20P01619 116 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 EDN2P20800 178 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 YAE1D1Q9NRH1 226 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 M0R2P5 195 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 SOCS3O14543 225 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 ACACBO00763 2458 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 CACNA1AO00555 2505 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 IGHV3-30-3P0DP02 117 aa10.44□□□□□ -0.74
SF1-201ENST00000227503 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
SF1-201ENST00000227503 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
SF1-201ENST00000227503 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
SF1-201ENST00000227503 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
SF1-201ENST00000227503 IGHV3-11P01762 117 aa10.43□□□□□ -0.74
SF1-201ENST00000227503 CELSR2Q9HCU4 2923 aa10.43□□□□□ -0.74
SF1-201ENST00000227503 ABCA2Q9BZC7 2435 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 BRD3OSQ6XYD6 125 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 LITAFQ99732 161 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 DOPEY2Q9Y3R5 2298 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 I3L3M4 83 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 NDUFA4O00483 81 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 ATP5J2P56134 94 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 LY6DQ14210 128 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms