RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 VSIG2Q96IQ7 327 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 CADP27708 2225 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 EP300Q09472 2414 aaPredicted RBP6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 TMEM61Q8N0U2 210 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 WFDC11Q8NEX6 87 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 HHLA3Q9XRX5 114 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 IGHV1-58A0A0C4DH39 117 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 COX7A2LO14548 114 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 RNF152Q8N8N0 203 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 PIFOQ8TCI5 191 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 CITED1Q99966 193 aa6.17□□□□□ -1.42
C1GALT1-201ENST00000223122 A0A0B4J2C4 111 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 TRBV10-2A0A0K0K1G8 114 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 IGKV2D-26A0A0A0MRZ7 120 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 MAP6D1Q9H9H5 199 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 SPTA1P02549 2419 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 CITED2Q99967 270 aaPredicted RBP6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 WNK2Q9Y3S1 2297 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 IGLV2-11P01706 119 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 DAZAP2Q15038 168 aaPredicted RBP6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 C20orf203Q8NBC4 194 aa6.16□□□□□ -1.42
C1GALT1-201ENST00000223122 MIR7-3HGQ8N6C7 128 aa6.15□□□□□ -1.42
C1GALT1-201ENST00000223122 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
C1GALT1-201ENST00000223122 PRB2P02812 416 aaPredicted RBP6.15□□□□□ -1.42
C1GALT1-201ENST00000223122 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.42
C1GALT1-201ENST00000223122 CPAMD8Q8IZJ3 1885 aa6.15□□□□□ -1.42
C1GALT1-201ENST00000223122 LY6LH3BQJ8 138 aa6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 LECT2O14960 151 aa6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 C9orf66Q5T8R8 295 aa6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 A0A0J9YXY3 114 aa6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 ACYP1P07311 99 aa6.15□□□□□ -1.43
C1GALT1-201ENST00000223122 PROK1P58294 105 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 LMO4P61968 165 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 C10orf99Q6UWK7 81 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 MYCNOSP40205 109 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 UBE2BP63146 152 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 DEFB135Q30KP9 77 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 A0A1B0GX51 115 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 U3KQK5 164 aa6.14□□□□□ -1.43
C1GALT1-201ENST00000223122 MIAQ16674 131 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 GPR179Q6PRD1 2367 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 C1orf43Q9BWL3 253 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 SPTBN1Q01082 2364 aaKnown RBP6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 MT-ATP8P03928 68 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 ATP5G1P05496 136 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 SMIM20Q8N5G0 67 aa6.13□□□□□ -1.43
C1GALT1-201ENST00000223122 HCFC1P51610 2035 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 RMI2Q96E14 147 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 H0YGX0 51 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 NDUFS5O43920 106 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 Q6ZTI0 123 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 DNAJC9-AS1A6NH13 148 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 TEX49A0A1B0GTD5 131 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 SPART-AS1P0CW21 52 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 PRR9Q5T870 116 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 SPANXDQ9BXN6 97 aa6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
C1GALT1-201ENST00000223122 TRAV26-1A0A087WT03 109 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 F8W735 103 aaPredicted RBP6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 NACAE9PAV3 2078 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 A8MZ25 164 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 SPTBN2O15020 2390 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
C1GALT1-201ENST00000223122 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 IGLV4-3A0A075B6K6 122 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 TMEM89A2RUT3 159 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 PRM2P04554 102 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 RNF183Q96D59 192 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 C11orf21Q9P2W6 132 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 ZNF22P17026 224 aaPredicted RBP6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 RAI1Q7Z5J4 1906 aaPredicted RBP6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 PSMB8P28062 276 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 ACACAQ13085 2346 aa6.1□□□□□ -1.43
C1GALT1-201ENST00000223122 TNFRSF13BO14836 293 aaPredicted RBP6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 SLPIP03973 132 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 LINC00310P59036 64 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 SPAG11BQ08648 103 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 C11orf71Q6IPW1 123 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 ZFAND2AQ8N6M9 145 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 TIRAPP58753 221 aa6.09□□□□□ -1.43
C1GALT1-201ENST00000223122 GVINP1Q7Z2Y8 2422 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms